RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 RPF2Q9H7B2 306 aaKnown RBP16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 NCDNQ9UBB6 729 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 MAPRE3Q9UPY8 281 aa16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 WBP11Q9Y2W2 641 aaKnown RBP16.33■□□□□ 0.21
PPFIA3-207ENST00000602716 MUC6Q6W4X9 2439 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 COL27A1Q8IZC6 1860 aaPredicted RBP16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 RALGAPA1Q6GYQ0 2036 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 C1orf226A1L170 272 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 ERN1O75460 977 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 ERAL1O75616 437 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 TIAF1O95411 115 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 DRD2P14416 443 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 GSTM5P46439 218 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 PCBP4P57723 403 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 ID2Q02363 134 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 HSPB3Q12988 150 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 C16orf72Q14CZ0 275 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 ZBED5Q49AG3 693 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 ANXA8L1Q5VT79 327 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 GPR141Q7Z602 305 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 PROSER1Q86XN7 944 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 OR4N5Q8IXE1 308 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 OR5AK3PQ8NH89 298 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 CXorf36Q9H7Y0 433 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 SIDT1Q9NXL6 827 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 SMPD3Q9NY59 655 aaPredicted RBP16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 MAU2Q9Y6X3 613 aa16.33■□□□□ 0.2
PPFIA3-207ENST00000602716 A0A1W2PRB8 838 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 CYR61O00622 381 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 TOX3O15405 576 aaPredicted RBP16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 CLOCKO15516 846 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 LDLRP01130 860 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 CAPGP40121 348 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 FRKP42685 505 aaPredicted RBP16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 CASP9P55211 416 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 CSRP2Q16527 193 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 CYBRD1Q53TN4 286 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 TCTE1Q5JU00 501 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 ZNF621Q6ZSS3 439 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 GPR155Q7Z3F1 870 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 SUN3Q8TAQ9 357 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 ZNF764Q96H86 408 aaPredicted RBP16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 LIN28AQ9H9Z2 209 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 SLC35C2Q9NQQ7 365 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 CUTCQ9NTM9 273 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 EHD3Q9NZN3 535 aa16.32■□□□□ 0.2
PPFIA3-207ENST00000602716 CHST10O43529 356 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 ZNF10P21506 573 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 FEN1P39748 380 aaKnown RBP16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 TRPC1P48995 793 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 OR4D2P58180 307 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 ESRRGP62508 458 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 SPIDRQ14159 915 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 GRM7Q14831 915 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 TTLL10Q6ZVT0 673 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 DHRSXQ8N5I4 330 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 FAM81AQ8TBF8 368 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 GLIPR2Q9H4G4 154 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 LYRM4Q9HD34 91 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 APMAPQ9HDC9 416 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 SIRT3Q9NTG7 399 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 OCIAD1Q9NX40 245 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 TAS2R7Q9NYW3 318 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 PHF11Q9UIL8 331 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 PCDHB3Q9Y5E6 796 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 OR2W5A6NFC9 320 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 ZNF701M0R085 212 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 ZNF749O43361 778 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 B4GALT2O60909 372 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 CLIC3O95833 236 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 NBL1P41271 181 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 ITGA1P56199 1179 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 DCTN2Q13561 401 aaKnown RBP16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 USP51Q70EK9 711 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 PATL1Q86TB9 770 aaKnown RBP16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 TTC29Q8NA56 475 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 DRAXINQ8NBI3 349 aaPredicted RBP16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 OR8J3Q8NGG0 315 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 AMDHD1Q96NU7 426 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 OR6C1Q96RD1 312 aa16.31■□□□□ 0.2
PPFIA3-207ENST00000602716 CROCCQ5TZA2 2017 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 FGF17O60258 216 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 LDB3O75112 727 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 GUCY1B2O75343 617 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 SEC24DO94855 1032 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 NSA2O95478 260 aaKnown RBP16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 MSL3P1P0C860 447 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 SOAT1P35610 550 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 BUD31P41223 144 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 OR1D4P47884 311 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 EMP3P54852 163 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 LTB4RQ15722 352 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 NDUFA9Q16795 377 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 GARNL3Q5VVW2 1013 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 DHRS4L2Q6PKH6 230 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 OR10A6Q8NH74 314 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 GOT1L1Q8NHS2 421 aaPredicted RBP16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 DOK4Q8TEW6 326 aa16.3■□□□□ 0.2
PPFIA3-207ENST00000602716 ISOC1Q96CN7 298 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms