RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SLX4Q8IY92 1834 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TMEM72A0PK05 275 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 GSAPA4D1B5 854 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 COLCA2A8K830 154 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 MINDY4BA8MYZ0 360 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TP53I11O14683 189 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TULP3O75386 442 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 LGI1O95970 557 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ITGAVP06756 1048 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 SNRNP70P08621 437 aaKnown RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 NPSP0C0P6 89 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 HAPLN1P10915 354 aaPredicted RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ABCD3P28288 659 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ACAA2P42765 397 aaKnown RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PTGER2P43116 358 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 KCNQ1P51787 676 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 GMFBP60983 142 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 FOXM1Q08050 763 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 C17orf67Q0P5P2 114 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 SEMA5AQ13591 1074 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 MBTPS1Q14703 1052 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PTCHD3Q3KNS1 767 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 C19orf48Q6RUI8 117 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 QSOX2Q6ZRP7 698 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 MOB2Q70IA6 237 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF720Q7Z2F6 126 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 ANGPTL5Q86XS5 388 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 PTRH1Q86Y79 214 aaKnown RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 DNAJC10Q8IXB1 793 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 GPRC5AQ8NFJ5 357 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 SEMA6DQ8NFY4 1073 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 THAP6Q8TBB0 222 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 LCN9Q8WX39 176 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 C3orf49Q96BT1 292 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 CMTM7Q96FZ5 175 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 MASTLQ96GX5 879 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 SENP5Q96HI0 755 aaPredicted RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 MMP19Q99542 508 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TEAD3Q99594 435 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 EBNA1BP2Q99848 306 aaKnown RBP8.45□□□□□ -1.06
COMMD3-215ENST00000602574 IFT27Q9BW83 186 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 POT1Q9NUX5 634 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 FKBPLQ9UIM3 349 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 C3orf18Q9UK00 162 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 SLC9A8Q9Y2E8 581 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 POFUT2Q9Y2G5 429 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 CMAHPQ9Y471 501 aa8.45□□□□□ -1.06
COMMD3-215ENST00000602574 TCRBV21S2A2A0A5A6 115 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 TBC1D3BA6NDS4 549 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 A8MWP6 167 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 CDRT15L2A8MXV6 281 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 PDXKO00764 312 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 LYRM1O43325 122 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 SUV39H1O43463 412 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 SLC25A17O43808 307 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 TRIM13O60858 407 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 CSF2P04141 144 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 RPLP2P05387 115 aaKnown RBP8.44□□□□□ -1.06
COMMD3-215ENST00000602574 AKAP5P24588 427 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 S100A2P29034 98 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 LCN1P31025 176 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 FHITP49789 147 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 CXADRP78310 365 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 PIGHQ14442 188 aaPredicted RBP8.44□□□□□ -1.06
COMMD3-215ENST00000602574 TRIP4Q15650 581 aaPredicted RBP8.44□□□□□ -1.06
COMMD3-215ENST00000602574 TKFCQ3LXA3 575 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 TBC1D3GQ6DHY5 549 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 CYHR1Q6ZMK1 362 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 CBLN2Q8IUK8 224 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 FUNDC1Q8IVP5 155 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 MINDY1Q8N5J2 469 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 ANKRD52Q8NB46 1076 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 ACBD4Q8NC06 268 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 BPIFCQ8NFQ6 507 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 OR11H7Q8NGC8 314 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 OR4Q3Q8NH05 313 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 PAQR8Q8TEZ7 354 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 LPAR1Q92633 364 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 KCNJ9Q92806 393 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 ACSF2Q96CM8 615 aaPredicted RBP8.44□□□□□ -1.06
COMMD3-215ENST00000602574 MRGPRX2Q96LB1 330 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 PNMA5Q96PV4 448 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 CPNE1Q99829 537 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 ACBD6Q9BR61 282 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 POLDIP3Q9BY77 421 aaKnown RBP8.44□□□□□ -1.06
COMMD3-215ENST00000602574 PIGMQ9H3S5 423 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 GREM2Q9H772 168 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 LHX9Q9NQ69 397 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 PLSCR4Q9NRQ2 329 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 CALML5Q9NZT1 146 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 SLC9A2Q9UBY0 812 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 EMCNQ9ULC0 261 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 RNF24Q9Y225 148 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 CDYLQ9Y232 598 aa8.44□□□□□ -1.06
COMMD3-215ENST00000602574 CCDC187A0A096LP49 1063 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 J3QW42 95 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 ADAP00813 363 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 FTLP02792 175 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 HOXB5P09067 269 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 SULT1A3P0DMM9 295 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms