RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PPWD1Q96BP3 646 aaKnown RBP15.01□□□□□ -0.01
LSM4-206ENST00000600289 TAAR6Q96RI8 345 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 SLX1AQ9BQ83 275 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 CXorf21Q9HAI6 301 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 EHD3Q9NZN3 535 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 PSME2Q9UL46 239 aa15.01□□□□□ -0.01
LSM4-206ENST00000600289 GNG14A0A1W2PPG7 69 aa15□□□□□ -0.01
LSM4-206ENST00000600289 ASPDHA6ND91 283 aa15□□□□□ -0.01
LSM4-206ENST00000600289 WIPF3A6NGB9 483 aa15□□□□□ -0.01
LSM4-206ENST00000600289 TCP11X1B4DZS4 312 aa15□□□□□ -0.01
LSM4-206ENST00000600289 RGS14O43566 566 aa15□□□□□ -0.01
LSM4-206ENST00000600289 SNUPNO95149 360 aaKnown RBP15□□□□□ -0.01
LSM4-206ENST00000600289 RASAL1O95294 804 aa15□□□□□ -0.01
LSM4-206ENST00000600289 CBX6O95503 412 aa15□□□□□ -0.01
LSM4-206ENST00000600289 CHEK2O96017 543 aa15□□□□□ -0.01
LSM4-206ENST00000600289 CLPSP04118 112 aa15□□□□□ -0.01
LSM4-206ENST00000600289 CHRNGP07510 517 aa15□□□□□ -0.01
LSM4-206ENST00000600289 SP1P08047 785 aa15□□□□□ -0.01
LSM4-206ENST00000600289 IL3P08700 152 aa15□□□□□ -0.01
LSM4-206ENST00000600289 EDN3P14138 238 aa15□□□□□ -0.01
LSM4-206ENST00000600289 PORP16435 677 aaPredicted RBP15□□□□□ -0.01
LSM4-206ENST00000600289 CSNK2A2P19784 350 aaPredicted RBP15□□□□□ -0.01
LSM4-206ENST00000600289 SSR4P51571 173 aa15□□□□□ -0.01
LSM4-206ENST00000600289 XKP51811 444 aa15□□□□□ -0.01
LSM4-206ENST00000600289 SLC37A1P57057 533 aa15□□□□□ -0.01
LSM4-206ENST00000600289 ERVK-8P63133 956 aa15□□□□□ -0.01
LSM4-206ENST00000600289 OC90Q02509 493 aaPredicted RBP15□□□□□ -0.01
LSM4-206ENST00000600289 ZNF763Q0D2J5 394 aa15□□□□□ -0.01
LSM4-206ENST00000600289 FUT7Q11130 342 aa15□□□□□ -0.01
LSM4-206ENST00000600289 KIAA0040Q15053 153 aa15□□□□□ -0.01
LSM4-206ENST00000600289 CEBPEQ15744 281 aa15□□□□□ -0.01
LSM4-206ENST00000600289 MPEG1Q2M385 716 aa15□□□□□ -0.01
LSM4-206ENST00000600289 SLC25A25Q6KCM7 469 aa15□□□□□ -0.01
LSM4-206ENST00000600289 GALNT12Q8IXK2 581 aa15□□□□□ -0.01
LSM4-206ENST00000600289 C9orf40Q8IXQ3 194 aa15□□□□□ -0.01
LSM4-206ENST00000600289 SAMD14Q8IZD0 417 aaPredicted RBP15□□□□□ -0.01
LSM4-206ENST00000600289 CLYBLQ8N0X4 340 aa15□□□□□ -0.01
LSM4-206ENST00000600289 ST6GALNAC3Q8NDV1 305 aa15□□□□□ -0.01
LSM4-206ENST00000600289 C16orf78Q8WTQ4 265 aa15□□□□□ -0.01
LSM4-206ENST00000600289 THAP3Q8WTV1 239 aaPredicted RBP15□□□□□ -0.01
LSM4-206ENST00000600289 FCRL1Q96LA6 429 aa15□□□□□ -0.01
LSM4-206ENST00000600289 C5orf34Q96MH7 638 aa15□□□□□ -0.01
LSM4-206ENST00000600289 ZNF681Q96N22 645 aa15□□□□□ -0.01
LSM4-206ENST00000600289 RASL10BQ96S79 203 aa15□□□□□ -0.01
LSM4-206ENST00000600289 ANKRD10Q9NXR5 420 aa15□□□□□ -0.01
LSM4-206ENST00000600289 HEY2Q9UBP5 337 aa15□□□□□ -0.01
LSM4-206ENST00000600289 ERVK-19Q9WJR5 959 aa15□□□□□ -0.01
LSM4-206ENST00000600289 DLGAP4Q9Y2H0 992 aa15□□□□□ -0.01
LSM4-206ENST00000600289 DNAJC15Q9Y5T4 150 aa15□□□□□ -0.01
LSM4-206ENST00000600289 MED13LQ71F56 2210 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 EML6Q6ZMW3 1958 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 A0A1W2PS29 197 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 HRKO00198 91 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 NME2P1O60361 137 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 SLC25A12O75746 678 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 OR2J2O76002 312 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 CRYABP02511 175 aaKnown RBP14.99□□□□□ -0.01
LSM4-206ENST00000600289 ANXA4P09525 319 aaPredicted RBP14.99□□□□□ -0.01
LSM4-206ENST00000600289 NME2P22392 152 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 ARRB2P32121 409 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 SLC18A1P54219 525 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 UGT3A2Q3SY77 523 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 SPDYAQ5MJ70 313 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 SPINK14Q6IE38 97 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 RNF111Q6ZNA4 994 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 Q6ZSR9 355 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 ZCCHC23Q6ZST2 131 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 IKBIPQ70UQ0 350 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 NUDCD3Q8IVD9 361 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 MMP21Q8N119 569 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 OR7G1Q8NGA0 311 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 NR4A3Q92570 626 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 KLHL29Q96CT2 875 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 CNRIP1Q96F85 164 aaPredicted RBP14.99□□□□□ -0.01
LSM4-206ENST00000600289 CNPPD1Q9BV87 410 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 CENPHQ9H3R5 247 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 TUBB1Q9H4B7 451 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 MYNNQ9NPC7 610 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 TRAF6Q9Y4K3 522 aa14.99□□□□□ -0.01
LSM4-206ENST00000600289 TMEM114B3SHH9 223 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 DDCP20711 480 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 TDGF1P3P51864 188 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 BTKQ06187 659 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 MGAT2Q10469 447 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 MAP4K2Q12851 820 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 MPP2Q14168 576 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 ZNF267Q14586 743 aaPredicted RBP14.98□□□□□ -0.01
LSM4-206ENST00000600289 EBPQ15125 230 aaKnown RBP14.98□□□□□ -0.01
LSM4-206ENST00000600289 NR6A1Q15406 480 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 PRICKLE4Q2TBC4 344 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 XKR7Q5GH72 579 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 C6orf163Q5TEZ5 329 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 NOXRED1Q6NXP6 359 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 SLC29A4Q7RTT9 530 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 DND1Q8IYX4 353 aaKnown RBP14.98□□□□□ -0.01
LSM4-206ENST00000600289 CYP4Z2PQ8N1L4 340 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 LRRC25Q8N386 305 aaPredicted RBP14.98□□□□□ -0.01
LSM4-206ENST00000600289 TMEM156Q8N614 296 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 SLC15A4Q8N697 577 aa14.98□□□□□ -0.01
LSM4-206ENST00000600289 ZNF615Q8N8J6 731 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms