RNA–Protein interactions for RNA: ENST00000599471.5

USF2-211, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-211ENST00000599471 STMN3Q9NZ72 180 aa16.38■□□□□ 0.21
USF2-211ENST00000599471 EHD3Q9NZN3 535 aa16.38■□□□□ 0.21
USF2-211ENST00000599471 LUZP4Q9P127 313 aa16.38■□□□□ 0.21
USF2-211ENST00000599471 BCAP29Q9UHQ4 241 aa16.38■□□□□ 0.21
USF2-211ENST00000599471 ZNF223Q9UK11 482 aaPredicted RBP16.38■□□□□ 0.21
USF2-211ENST00000599471 EXO1Q9UQ84 846 aaKnown RBP16.38■□□□□ 0.21
USF2-211ENST00000599471 WBP11Q9Y2W2 641 aaKnown RBP16.38■□□□□ 0.21
USF2-211ENST00000599471 ZFYVE26Q68DK2 2539 aa16.38■□□□□ 0.21
USF2-211ENST00000599471 PDPK1O15530 556 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 PRKNO60260 465 aaPredicted RBP16.37■□□□□ 0.21
USF2-211ENST00000599471 DPM1O60762 260 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 ZFAND5O76080 213 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 MRPS35P82673 323 aaKnown RBP16.37■□□□□ 0.21
USF2-211ENST00000599471 EXOSC7Q15024 291 aaKnown RBP16.37■□□□□ 0.21
USF2-211ENST00000599471 MEP1AQ16819 746 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 ZNF385BQ569K4 471 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 ACER2Q5QJU3 275 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 C16orf47Q6ZP98 133 aaPredicted RBP16.37■□□□□ 0.21
USF2-211ENST00000599471 RPS19BP1Q86WX3 136 aaKnown RBP16.37■□□□□ 0.21
USF2-211ENST00000599471 FAM9CQ8IZT9 166 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 BEST3Q8N1M1 668 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 KRTCAP2Q8N6L1 136 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 TEX19Q8NA77 164 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 OR7A2PQ8NGA2 310 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 NUDT8Q8WV74 236 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 CIDECQ96AQ7 238 aaPredicted RBP16.37■□□□□ 0.21
USF2-211ENST00000599471 FBXL20Q96IG2 436 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 MAGED4Q96JG8 741 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 ZNF681Q96N22 645 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■■■■□ 22.5
USF2-211ENST00000599471 ANKRD10Q9NXR5 420 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 ABI3Q9P2A4 366 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 ATRXP46100 2492 aa16.37■□□□□ 0.21
USF2-211ENST00000599471 ATMQ13315 3056 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 DYTNA2CJ06 578 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 WWP2O00308 870 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 SCAMP2O15127 329 aaKnown RBP16.36■□□□□ 0.21
USF2-211ENST00000599471 PCSK2P16519 638 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 MPIP34949 423 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 SOX11P35716 441 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 CD97P48960 835 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 GPR143P51810 404 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 OC90Q02509 493 aaPredicted RBP16.36■□□□□ 0.21
USF2-211ENST00000599471 SF3A3Q12874 501 aaKnown RBP eCLIP16.36■□□□□ 0.212e-11■■■■■ 52.2
USF2-211ENST00000599471 SPRED3Q2MJR0 410 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 PGS1Q32NB8 556 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 NADK2Q4G0N4 442 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 ACAD11Q709F0 780 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 LARP4Q71RC2 724 aaKnown RBP eCLIP16.36■□□□□ 0.212e-9■■□□□ 11.5
USF2-211ENST00000599471 SLC29A4Q7RTT9 530 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 R3HCC1LQ7Z5L2 792 aaKnown RBP16.36■□□□□ 0.21
USF2-211ENST00000599471 SAMD14Q8IZD0 417 aaPredicted RBP16.36■□□□□ 0.21
USF2-211ENST00000599471 VWA5B2Q8N398 1253 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 OR52B2Q96RD2 323 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 NPAS2Q99743 824 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 DPY30Q9C005 99 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 MAT2BQ9NZL9 334 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 PCDHGB7Q9Y5F8 929 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 CSAG2Q9Y5P2 127 aa16.36■□□□□ 0.21
USF2-211ENST00000599471 GABRR3A8MPY1 467 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 FCHO1O14526 889 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 WDPCPO95876 746 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 ATP1B1P05026 303 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 VIMP08670 466 aaKnown RBP16.35■□□□□ 0.21
USF2-211ENST00000599471 GALNSP34059 522 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 GPC1P35052 558 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 AQP5P55064 265 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 RNF4P78317 190 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 HSPB3Q12988 150 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 RPS6KA2Q15349 733 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 SMU1Q2TAY7 513 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 PRICKLE4Q2TBC4 344 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 LSM14AQ8ND56 463 aaKnown RBP16.35■□□□□ 0.21
USF2-211ENST00000599471 LMF1Q96S06 567 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 GLIPR2Q9H4G4 154 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 ANKRA2Q9H9E1 313 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 NPHS2Q9NP85 383 aa16.35■□□□□ 0.21
USF2-211ENST00000599471 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.35■□□□□ 0.21
USF2-211ENST00000599471 PPIEQ9UNP9 301 aaKnown RBP16.35■□□□□ 0.21
USF2-211ENST00000599471 IGSF10Q6WRI0 2623 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 CNTRLQ7Z7A1 2325 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 MYO1GB0I1T2 1018 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 POLR3GO15318 223 aaPredicted RBP16.34■□□□□ 0.21
USF2-211ENST00000599471 EDF1O60869 148 aaKnown RBP16.34■□□□□ 0.21
USF2-211ENST00000599471 ALDOCP09972 364 aaKnown RBP16.34■□□□□ 0.21
USF2-211ENST00000599471 DDX5P17844 614 aaKnown RBP16.34■□□□□ 0.21
USF2-211ENST00000599471 RPL3P39023 403 aaKnown RBP16.34■□□□□ 0.21
USF2-211ENST00000599471 MLF1P58340 268 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 TRMT12Q53H54 448 aaKnown RBP16.34■□□□□ 0.21
USF2-211ENST00000599471 CPTPQ5TA50 214 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 HLA-DQA1Q5Y7H0 255 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 TMEM198Q66K66 360 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 H3F3CQ6NXT2 135 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 TMEM107Q6UX40 140 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 ZNF551Q7Z340 670 aaPredicted RBP16.34■□□□□ 0.21
USF2-211ENST00000599471 SZRD1Q7Z422 152 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 SPATA19Q7Z5L4 167 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 C9orf40Q8IXQ3 194 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 TMEM156Q8N614 296 aa16.34■□□□□ 0.21
USF2-211ENST00000599471 RBMXL3Q8N7X1 1067 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 213.5 ms