RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 BRINP2Q9C0B6 783 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 BAIAP2L1Q9UHR4 511 aa18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 EIF3LQ9Y262 564 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-214ENST00000597396 BOD1L1Q8NFC6 3051 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 TRPC5OSA6NMA1 111 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 GABRR3A8MPY1 467 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 HRKO00198 91 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 FCHO1O14526 889 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 HDAC3O15379 428 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 ATP8B1O43520 1251 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 VPS4BO75351 444 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 WDPCPO95876 746 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 ATP1B1P05026 303 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 PRPS2P11908 318 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 MLF1P58340 268 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 DUSP2Q05923 314 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 SLC6A19Q695T7 634 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 CCDC116Q8IYX3 515 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 ZNF681Q96N22 645 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 RNF32Q9H0A6 362 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 REEP4Q9H6H4 257 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 AKTIPQ9H8T0 292 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 MEAF6Q9HAF1 191 aa18.28■□□□□ 0.52
SHKBP1-214ENST00000597396 ASH1LQ9NR48 2969 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 PRKNO60260 465 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 MAN1A2O60476 641 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 IGKV3-11P04433 115 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 CT62P0C5K7 136 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 NTSP30990 170 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 PTGER1P34995 402 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 HPCAL1P37235 193 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 CASRP41180 1078 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 RNF4P78317 190 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 EMX2Q04743 252 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 SMU1Q2TAY7 513 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 SLC29A4Q7RTT9 530 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 WDR75Q8IWA0 830 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 ADCY4Q8NFM4 1077 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 OR5L2Q8NGL0 311 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 OR8K3Q8NH51 312 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 PIWIL2Q8TC59 973 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 HAS2Q92819 552 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 PNPLA2Q96AD5 504 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 PPCDCQ96CD2 204 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 UTP23Q9BRU9 249 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 MED4Q9NPJ6 270 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 SLAMF7Q9NQ25 335 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 NOP53Q9NZM5 478 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 LUZP4Q9P127 313 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 EXO1Q9UQ84 846 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 B3GNT3Q9Y2A9 372 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 CSAG2Q9Y5P2 127 aa18.27■□□□□ 0.52
SHKBP1-214ENST00000597396 TENM4Q6N022 2769 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 OR5H15A6NDH6 313 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 DDX5P17844 614 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 LBPP18428 481 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 SSTR4P31391 388 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 MPIP34949 423 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 ST13P50502 369 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 OC90Q02509 493 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 LTB4RQ15722 352 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 PRICKLE4Q2TBC4 344 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 FAM111BQ6SJ93 734 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 Q6ZS92 163 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 R3HCC1LQ7Z5L2 792 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 FAM9CQ8IZT9 166 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 VWA5B2Q8N398 1253 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 ARFGAP2Q8N6H7 521 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 SUN3Q8TAQ9 357 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 CKAP2Q8WWK9 683 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 MAGEB18Q96M61 343 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 C7orf26Q96N11 449 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 LIN28AQ9H9Z2 209 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 TAS2R7Q9NYW3 318 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 MAT2BQ9NZL9 334 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 SH3BP4Q9P0V3 963 aa18.26■□□□□ 0.51
SHKBP1-214ENST00000597396 EML6Q6ZMW3 1958 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 OR6C76A6NM76 312 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 MYO1GB0I1T2 1018 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 SDHDO14521 159 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 PDPK1O15530 556 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 ITGA10O75578 1167 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 RPL3P39023 403 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 NCBP2P52298 156 aaKnown RBP eCLIP18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 SLC37A1P57057 533 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 KCNC4Q03721 635 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 FUT7Q11130 342 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 MAP4K2Q12851 820 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 PTGR1Q14914 329 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 ZNF169Q14929 603 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 TLR1Q15399 786 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 CEBPEQ15744 281 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 PRSS53Q2L4Q9 553 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 ANKRD26P1Q6NSI1 321 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 C9orf40Q8IXQ3 194 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 ARMC10Q8N2F6 343 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 TMEM156Q8N614 296 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 CATSPER1Q8NEC5 780 aa18.25■□□□□ 0.51
SHKBP1-214ENST00000597396 OR7G1Q8NGA0 311 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms