RNA–Protein interactions for RNA: ENST00000596900.5

SPTBN4-210, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-210ENST00000596900 MATN1P21941 496 aa21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 RPS26P62854 115 aaKnown RBP21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 COL9A2Q14055 689 aaPredicted RBP21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 ELOAQ14241 798 aaKnown RBP21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 ENPP6Q6UWR7 440 aa21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 PRR23CQ6ZRP0 262 aa21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 CBLL1Q75N03 491 aa21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 TMPRSS9Q7Z410 1059 aa21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 ZC3H7AQ8IWR0 971 aaKnown RBP21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 NUP43Q8NFH3 380 aa21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 GFM1Q96RP9 751 aaKnown RBP21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 P2RX2Q9UBL9 471 aa21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 NDOR1Q9UHB4 597 aa21.59■■□□□ 1.05
SPTBN4-210ENST00000596900 IGHV5-10-1A0A0J9YXX1 117 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 CASC3O15234 703 aaKnown RBP21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 IFI6P09912 130 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 MAPK10P53779 464 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 EIF3MQ7L2H7 374 aaKnown RBP21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 METTL25Q8N6Q8 603 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 EME1Q96AY2 570 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 ASPSCR1Q9BZE9 553 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 SEMA6AQ9H2E6 1030 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 OR51I1Q9H343 314 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 TRPC4Q9UBN4 977 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 SRPK3Q9UPE1 567 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 C15orf41Q9Y2V0 281 aa21.58■■□□□ 1.05
SPTBN4-210ENST00000596900 SCN2AQ99250 2005 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 HMGN4O00479 90 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 LDOC1O95751 146 aaPredicted RBP21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 HMGN2P05204 90 aaKnown RBP21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 CKMT2P17540 419 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 ALAS2P22557 587 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 MAT1AQ00266 395 aaKnown RBP21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 SLC13A2Q13183 592 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 LTB4RQ15722 352 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 REEP3Q6NUK4 255 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 DBX2Q6ZNG2 339 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 CCDC80Q76M96 950 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 FAM86B1Q8N7N1 296 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 OR51Q1Q8NH59 317 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 FAM110BQ8TC76 370 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 MIPOL1Q8TD10 442 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 DNAJC9Q8WXX5 260 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 CENPNQ96H22 339 aaPredicted RBP21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 CNDP2Q96KP4 475 aaKnown RBP21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 MS4A4EQ96PG1 132 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 ZNF184Q99676 751 aaPredicted RBP21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 NTMQ9P121 344 aa21.58■■□□□ 1.04
SPTBN4-210ENST00000596900 VPS13AQ96RL7 3174 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 RALGAPA1Q6GYQ0 2036 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 PRR33A8MZF0 331 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 CTNSO60931 367 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 DEAF1O75398 565 aaPredicted RBP21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 LDLRP01130 860 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 NT5EP21589 574 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 AQP1P29972 269 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 PTGER1P34995 402 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 ID2Q02363 134 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 EEF1A2Q05639 463 aaKnown RBP21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 GNA13Q14344 377 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 LASP1Q14847 261 aaKnown RBP21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 ATP6AP1Q15904 470 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 HMBOX1Q6NT76 420 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 IZUMO2Q6UXV1 221 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 AMIGO2Q86SJ2 522 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 PATL1Q86TB9 770 aaKnown RBP21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 METTL27Q8N6F8 245 aaPredicted RBP21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 KAT2AQ92830 837 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 ANKRD9Q96BM1 317 aaPredicted RBP21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 CCDC74BQ96LY2 380 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 BDH2Q9BUT1 245 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 RBCK1Q9BYM8 510 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 PRTFDC1Q9NRG1 225 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 DTNAQ9Y4J8 743 aa21.57■■□□□ 1.04
SPTBN4-210ENST00000596900 DSCR3O14972 297 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 ZNF749O43361 778 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 SUV39H1O43463 412 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 PDE9AO76083 593 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 BCHEP06276 602 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 GP1BAP07359 652 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 SLC35E2P0CK97 266 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 HSD17B7P56937 341 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 STX4Q12846 297 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 ANKFN1Q8N957 763 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 ZNF675Q8TD23 568 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 LZICQ8WZA0 190 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 COL5A1P20908 1838 aaPredicted RBP21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 A0A087WV62 115 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 A0A1B0GX78 115 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 UPK1AO00322 258 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 ASNA1O43681 348 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 OR10H2O60403 315 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 CAPNS1P04632 268 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 XCR1P46094 333 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 GCGRP47871 477 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 MRPS35P82673 323 aaKnown RBP21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 ZNF628Q5EBL2 1059 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 CRB2Q5IJ48 1285 aa21.56■■□□□ 1.04
SPTBN4-210ENST00000596900 OR2L13Q8N349 312 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms