RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 EBPQ15125 230 aaKnown RBP9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 SF3B4Q15427 424 aaKnown RBP eCLIP9.69□□□□□ -0.869e-6■□□□□ 11.2
CHMP2A-202ENST00000596708 SPRED3Q2MJR0 410 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 TMEM64Q6YI46 380 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 MAATS1Q7Z4T9 603 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 ANKHD1Q8IWZ3 2542 aaKnown RBP9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 PPM1NQ8N819 430 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 NAXEQ8NCW5 288 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 FAM222BQ8WU58 562 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 UBTD2Q8WUN7 234 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 NXNL1Q96CM4 212 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 ATOH8Q96SQ7 321 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 TIMP4Q99727 224 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 NAPGQ99747 312 aaPredicted RBP9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 SH3GL2Q99962 352 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 ACTR8Q9H981 624 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 DMRT3Q9NQL9 472 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 RYDENQ9NUL5 291 aaKnown RBP9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 ZNF629Q9UEG4 869 aaPredicted RBP9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 FOXD3Q9UJU5 478 aaPredicted RBP9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 CAMK2AQ9UQM7 478 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 PCDHGA11Q9Y5H2 935 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 NPFFR2Q9Y5X5 522 aa9.69□□□□□ -0.86
CHMP2A-202ENST00000596708 DSCAMO60469 2012 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 A0A1W2PR48 441 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 TUBAL3A6NHL2 446 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 SYCE1LA8MT33 242 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 KDM4EB2RXH2 506 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 TRIM3O75382 744 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 EEDO75530 441 aaKnown RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 GSTA2P09210 222 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 FAM58BPP0C7Q3 252 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 SLC35E2BP0CK96 405 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 NR2F6P10588 404 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 GFAPP14136 432 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 PIK3R1P27986 724 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 CRABP2P29373 138 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 SSTR4P31391 388 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 GALNSP34059 522 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 BSGP35613 385 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 ARL1P40616 181 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 AGFG1P52594 562 aaKnown RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 ARFIP1P53367 373 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 NRG3P56975 720 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 FBXW4P57775 412 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 GPX6P59796 221 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 RPP38P78345 283 aaKnown RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 PCDH1Q08174 1060 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 CRYZQ08257 329 aaKnown RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 FOXD4Q12950 439 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 CBLBQ13191 982 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 RPS6KA2Q15349 733 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 CPSF6Q16630 551 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 KBTBD12Q3ZCT8 623 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 ACSF3Q4G176 576 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 LIPJQ5W064 366 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 BICRALQ6AI39 1079 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 CYS1Q717R9 158 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 PACS2Q86VP3 889 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 LACC1Q8IV20 430 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 PM20D2Q8IYS1 436 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 UCN3Q969E3 161 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 TP53INP1Q96A56 240 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 REPS1Q96D71 796 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 HSPBAP1Q96EW2 488 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 RILPQ96NA2 401 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 TRIB1Q96RU8 372 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 GSX1Q9H4S2 264 aaPredicted RBP9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 SNX15Q9NRS6 342 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 WHRNQ9P202 907 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 CBLCQ9ULV8 474 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 SLC6A5Q9Y345 797 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 ASB4Q9Y574 426 aa9.68□□□□□ -0.86
CHMP2A-202ENST00000596708 A0A0A6YYD5 115 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 ANKRD33BA6NCL7 494 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 FAM187AA6NFU0 413 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 GNB5O14775 395 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 TMPRSS11DO60235 418 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 SNX4O95219 450 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 AIFM1O95831 613 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 GBAP04062 536 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 CLPSP04118 112 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 SLC35E2P0CK97 266 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 HOXB4P17483 251 aaPredicted RBP9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 KRT15P19012 456 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 NT5EP21589 574 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 PIK3CGP48736 1102 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 TMED10P49755 219 aaKnown RBP9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 CDK9P50750 372 aaKnown RBP9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 NEK2P51955 445 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 ZNF136P52737 540 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 GTF2H2Q13888 395 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 KEAP1Q14145 624 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 DAZAP2Q15038 168 aaPredicted RBP9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 SETDB1Q15047 1291 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 PFKFB4Q16877 469 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 FBXL19-AS1Q494R0 122 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 EIPR1Q53HC9 387 aa9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 WIPI1Q5MNZ9 446 aaPredicted RBP9.67□□□□□ -0.86
CHMP2A-202ENST00000596708 C6orf163Q5TEZ5 329 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms