RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 DRD2P14416 443 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 CNR1P21554 472 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 SOX18P35713 384 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 MGAT2Q10469 447 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 MAP4K2Q12851 820 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 ZNF750Q32MQ0 723 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 C1QL3Q5VWW1 255 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 LIPMQ5VYY2 423 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 SLC29A4Q7RTT9 530 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 MAMDC2Q7Z304 686 aaPredicted RBP12.06□□□□□ -0.48
USE1-207ENST00000596136 TRIM46Q7Z4K8 759 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 SPPL2CQ8IUH8 684 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 GALNT12Q8IXK2 581 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 DND1Q8IYX4 353 aaKnown RBP12.06□□□□□ -0.48
USE1-207ENST00000596136 MMP21Q8N119 569 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 GHDCQ8N2G8 530 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 OR2M7Q8NG81 312 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 OR7G1Q8NGA0 311 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 SLC22A8Q8TCC7 542 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 CTHRC1Q96CG8 243 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 APIPQ96GX9 242 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 CNPPD1Q9BV87 410 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 FAIM2Q9BWQ8 316 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 PLSCR2Q9NRY7 297 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 ZNF639Q9UID6 485 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 MID2Q9UJV3 735 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 PSME2Q9UL46 239 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 TLDC2A0PJX2 215 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 GOLGA6L10A6NI86 522 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 NPIPB8E9PQR5 432 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 GLSO94925 669 aaPredicted RBP12.05□□□□□ -0.48
USE1-207ENST00000596136 FBXO45P0C2W1 286 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 CSNK2A2P19784 350 aaPredicted RBP12.05□□□□□ -0.48
USE1-207ENST00000596136 SSTR4P31391 388 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 GSTM5P46439 218 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 HMGCS1Q01581 520 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 ACSM2AQ08AH3 577 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 FOXO1Q12778 655 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 PCLAFQ15004 111 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 HYAL4Q2M3T9 481 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 PRICKLE4Q2TBC4 344 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 CMPK2Q5EBM0 449 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 CFAP157Q5JU67 520 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 ACSM2BQ68CK6 577 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 RGS9BPQ6ZS82 235 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 RNF165Q6ZSG1 346 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 FGD2Q7Z6J4 655 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 FJX1Q86VR8 437 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 C17orf47Q8NEP4 570 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 FAM76AQ8TAV0 307 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.05□□□□□ -0.48
USE1-207ENST00000596136 DOK4Q8TEW6 326 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 PAQR8Q8TEZ7 354 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 ADIPOR1Q96A54 375 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 SPACA9Q96E40 222 aaPredicted RBP12.05□□□□□ -0.48
USE1-207ENST00000596136 CNRIP1Q96F85 164 aaPredicted RBP12.05□□□□□ -0.48
USE1-207ENST00000596136 APOPT1Q96IL0 206 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 METTL2AQ96IZ6 378 aaKnown RBP12.05□□□□□ -0.48
USE1-207ENST00000596136 FAM173AQ9BQD7 235 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 TSPAN10Q9H1Z9 355 aaPredicted RBP12.05□□□□□ -0.48
USE1-207ENST00000596136 OR10A5Q9H207 317 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 TNFRSF12AQ9NP84 129 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 HEY2Q9UBP5 337 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 RAB21Q9UL25 225 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 CCL27Q9Y4X3 112 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 NCOA6Q14686 2063 aaPredicted RBP12.05□□□□□ -0.48
USE1-207ENST00000596136 CRYBG3Q68DQ2 2970 aa12.05□□□□□ -0.48
USE1-207ENST00000596136 NINQ8N4C6 2090 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 TRGV8A0A0C4DH27 118 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 PINLYPA6NC86 204 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 ESPNB1AK53 854 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 HS6ST1O60243 411 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 PCDH7O60245 1069 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 ZG16O60844 167 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 TRIM13O60858 407 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 CCL3P10147 92 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 UROSP10746 265 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 PRPH2P23942 346 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 TIA1P31483 386 aaKnown RBP eCLIP12.04□□□□□ -0.48
USE1-207ENST00000596136 DEKP35659 375 aaKnown RBP12.04□□□□□ -0.48
USE1-207ENST00000596136 GPR85P60893 370 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 CEBPEQ15744 281 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 C3AR1Q16581 482 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 NTRK2Q16620 822 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 ERCC6LQ2NKX8 1250 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 SLC22A10Q63ZE4 541 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 MTFR2Q6P444 385 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 C10orf107Q8IVU9 208 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 HOMEZQ8IX15 550 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 C16orf78Q8WTQ4 265 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 SREK1Q8WXA9 508 aaKnown RBP12.04□□□□□ -0.48
USE1-207ENST00000596136 TRMOQ9BU70 441 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 GATA5Q9BWX5 397 aaPredicted RBP12.04□□□□□ -0.48
USE1-207ENST00000596136 PARD6BQ9BYG5 372 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 SHCBP1LQ9BZQ2 653 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 ZDHHC11Q9H8X9 412 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 SACM1LQ9NTJ5 587 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 MAT2BQ9NZL9 334 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 EHD3Q9NZN3 535 aa12.04□□□□□ -0.48
USE1-207ENST00000596136 DLGAP4Q9Y2H0 992 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms