RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PLXND1Q9Y4D7 1925 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 HEPACAM2A8MVW5 462 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 ACRP10323 421 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 KCNJ5P48544 419 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 GALK2Q01415 458 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 MXD1Q05195 221 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 CNTN1Q12860 1018 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 NCF4Q15080 339 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 SYPL1Q16563 259 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 GLYR1Q49A26 553 aaPredicted RBP15.62■□□□□ 0.09
LIG1-206ENST00000594067 MEDAGQ5VYS4 303 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 NOXA1Q86UR1 476 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 COMTD1Q86VU5 262 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 OR2L2Q8NH16 312 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 SLC7A13Q8TCU3 470 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 HCAR2Q8TDS4 363 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 ING5Q8WYH8 240 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 SMPDL3AQ92484 453 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 OTUB1Q96FW1 271 aaPredicted RBP15.62■□□□□ 0.09
LIG1-206ENST00000594067 ZNF354BQ96LW1 612 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 SEC14L3Q9UDX4 400 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 A0A0G2JN53 185 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 IQCMA0A1B0GVH7 501 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 M0R3H8 397 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 CHRM5P08912 532 aaPredicted RBP15.61■□□□□ 0.09
LIG1-206ENST00000594067 ITGB7P26010 798 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 PSMB5P28074 263 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 ERVFC1P60507 584 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 SCN1BQ07699 218 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 YIF1BQ5BJH7 314 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 TMEM201Q5SNT2 666 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 LIPKQ5VXJ0 399 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 PPP2R2DQ66LE6 453 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 C17orf64Q86WR6 236 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 FAM181AQ8N9Y4 354 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 OR5D16Q8NGK9 328 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 MND1Q9BWT6 205 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 MS4A8Q9BY19 250 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 OR52A5Q9H2C5 316 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 DPEP2Q9H4A9 486 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 SERHL2Q9H4I8 314 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 SLA2Q9H6Q3 261 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 RPL36Q9Y3U8 105 aaKnown RBP15.61■□□□□ 0.09
LIG1-206ENST00000594067 PRAMEF27A3QJZ7 478 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 TLX2O43763 284 aaPredicted RBP15.61■□□□□ 0.09
LIG1-206ENST00000594067 OR12D1P0DN82 309 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 CHRNB1P11230 501 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 CSF2RAP15509 400 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 DDX6P26196 483 aaKnown RBP eCLIP15.61■□□□□ 0.097e-10■■■■■ 60
LIG1-206ENST00000594067 LSM11P83369 360 aaKnown RBP eCLIP15.61■□□□□ 0.09
LIG1-206ENST00000594067 RUNX1T1Q06455 604 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 ASAH1Q13510 395 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 HEPACAMQ14CZ8 416 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 LARS2Q15031 903 aaKnown RBP15.61■□□□□ 0.09
LIG1-206ENST00000594067 DHCR24Q15392 516 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 CCDC58Q4VC31 144 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 GPAT3Q53EU6 434 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 MFSD4BQ5TF39 518 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 PLPP4Q5VZY2 271 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 C11orf96Q7Z7L8 435 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 NANOGP1Q8N7R0 232 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 ZNF296Q8WUU4 475 aaPredicted RBP15.61■□□□□ 0.09
LIG1-206ENST00000594067 RNF208Q9H0X6 261 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 RERGLQ9H628 205 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 NDOR1Q9UHB4 597 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 STUB1Q9UNE7 303 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 CMAHPQ9Y471 501 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 C17orf113A0A1B0GUU1 675 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 PDE9AO76083 593 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 CISD3P0C7P0 127 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 KELP23276 732 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 ITGB8P26012 769 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 GSTM5P46439 218 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 DAB2P98082 770 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 FAM92BQ6ZTR7 304 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 TRIM69Q86WT6 500 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 RDH10Q8IZV5 341 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 OR8J1Q8NGP2 316 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 XAGE5Q8WWM1 108 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 NXPE3Q969Y0 559 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 ZFYVE19Q96K21 471 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 LINC00615Q96LM1 132 aaPredicted RBP15.61■□□□□ 0.09
LIG1-206ENST00000594067 SLC22A4Q9H015 551 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 MIXL1Q9H2W2 232 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 PAK6Q9NQU5 681 aaPredicted RBP15.61■□□□□ 0.09
LIG1-206ENST00000594067 CTPS2Q9NRF8 586 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 TEX10Q9NXF1 929 aaPredicted RBP15.61■□□□□ 0.09
LIG1-206ENST00000594067 MARK1Q9P0L2 795 aa15.61■□□□□ 0.09
LIG1-206ENST00000594067 HYKKA2RU49 373 aa15.6■□□□□ 0.09
LIG1-206ENST00000594067 H7BY64 318 aa15.6■□□□□ 0.09
LIG1-206ENST00000594067 PRKYO43930 277 aa15.6■□□□□ 0.09
LIG1-206ENST00000594067 TMPRSS11DO60235 418 aa15.6■□□□□ 0.09
LIG1-206ENST00000594067 NME6O75414 186 aaPredicted RBP15.6■□□□□ 0.09
LIG1-206ENST00000594067 TP53P04637 393 aaPredicted RBP15.6■□□□□ 0.09
LIG1-206ENST00000594067 YES1P07947 543 aa15.6■□□□□ 0.09
LIG1-206ENST00000594067 PTGER1P34995 402 aa15.6■□□□□ 0.09
LIG1-206ENST00000594067 CCT3P49368 545 aaKnown RBP15.6■□□□□ 0.09
LIG1-206ENST00000594067 PCBP4P57723 403 aaKnown RBP15.6■□□□□ 0.09
LIG1-206ENST00000594067 PODNL1Q6PEZ8 512 aa15.6■□□□□ 0.09
LIG1-206ENST00000594067 AMER3Q8N944 861 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms