RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 WWTR1Q9GZV5 400 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 SIRT5Q9NXA8 310 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 RAB21Q9UL25 225 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 ZNF835Q9Y2P0 537 aa17.09■□□□□ 0.33
SHKBP1-202ENST00000593764 A0A0G2JMM0 328 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 A0A1B0GUH1 482 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 A0A1W2PPB8 328 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 A0A1W2PRS3 328 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 PINLYPA6NC86 204 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 OR6C76A6NM76 312 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 KIR3DP1A8MWS1 328 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 H3BQF6 201 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 PCDH7O60245 1069 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 CREB1P16220 341 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 FEN1P39748 380 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 DUSP2Q05923 314 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 BTKQ06187 659 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 ACSM2AQ08AH3 577 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 EBPQ15125 230 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 SPIN4Q56A73 249 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 ACSM2BQ68CK6 577 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 FAM180BQ6P0A1 224 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 RTL4Q6ZR62 310 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 SLC29A4Q7RTT9 530 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 TRIM46Q7Z4K8 759 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 FJX1Q86VR8 437 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 GALNT12Q8IXK2 581 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 SLC15A4Q8N697 577 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNF441Q8N8Z8 693 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 GOLM1Q8NBJ4 401 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 CNRIP1Q96F85 164 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 SGCZQ96LD1 299 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 SH2D2AQ9NP31 389 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 SLC17A7Q9P2U7 560 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 PLEKHB1Q9UF11 243 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 MID2Q9UJV3 735 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 DLGAP4Q9Y2H0 992 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 CROCCQ5TZA2 2017 aa17.08■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNHIT1O43257 154 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 SLC19A2O60779 497 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 TRIM13O60858 407 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 SPAG7O75391 227 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 ERAL1O75616 437 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 CLDN1O95832 211 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 ATP1B1P05026 303 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 IL3P08700 152 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 CNR1P21554 472 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 NT5EP21589 574 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 TIA1P31483 386 aaKnown RBP eCLIP17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 CA7P43166 264 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 MAP4K2Q12851 820 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 PRICKLE4Q2TBC4 344 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 Q6ZPB1 254 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 FGD2Q7Z6J4 655 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 OR2M7Q8NG81 312 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 C16orf78Q8WTQ4 265 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 ADIPOR1Q96A54 375 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 FAM111AQ96PZ2 611 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 GAL3ST4Q96RP7 486 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 FAIM2Q9BWQ8 316 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 OR10A5Q9H207 317 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 ZNF639Q9UID6 485 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 PSME2Q9UL46 239 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 CCL27Q9Y4X3 112 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 PCNX1Q96RV3 2341 aa17.07■□□□□ 0.32
SHKBP1-202ENST00000593764 TRGV8A0A0C4DH27 118 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 GNG14A0A1W2PPG7 69 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 A1L4Q6 167 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 GOLGA6L10A6NI86 522 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 G3V3Y1 287 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 HS6ST1O60243 411 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 CCL3P10147 92 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 UROSP10746 265 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 DRD2P14416 443 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 CSNK2A2P19784 350 aaPredicted RBP17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 ALDH3A1P30838 453 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 PTGER1P34995 402 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 ALDH9A1P49189 494 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 HSF1Q00613 529 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 RBPJQ06330 500 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 CMPK2Q5EBM0 449 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 SPDYAQ5MJ70 313 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 HIST2H2BCQ6DN03 193 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 CLEC6AQ6EIG7 209 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 FAM111BQ6SJ93 734 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 SPPL2CQ8IUH8 684 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 GHDCQ8N2G8 530 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 SLC22A8Q8TCC7 542 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 TCP10LQ8TDR4 215 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 CTHRC1Q96CG8 243 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 KLHL29Q96CT2 875 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 MECRQ9BV79 373 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 EBPLQ9BY08 206 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 MAT2BQ9NZL9 334 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 UTS2RQ9UKP6 389 aa17.06■□□□□ 0.32
SHKBP1-202ENST00000593764 C2orf92A0A1B0GVN3 265 aa17.05■□□□□ 0.32
SHKBP1-202ENST00000593764 TFECO14948 347 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms