RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PEX19P40855 299 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 PIK3CGP48736 1102 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 GUCY2DQ02846 1103 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 GTF2H2Q13888 395 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 HSPB2Q16082 182 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 MROH9Q5TGP6 573 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 OR52E8Q6IFG1 317 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 GTF2H2CQ6P1K8 395 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 METTL2BQ6P1Q9 378 aaKnown RBP21.96■■□□□ 1.11
LSM4-202ENST00000593564 SEM1Q6ZVN7 128 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 GOLGA7Q7Z5G4 137 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 NUDT13Q86X67 352 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 WDR20Q8TBZ3 569 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 TP53INP1Q96A56 240 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 SNX15Q9NRS6 342 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 DNAJB12Q9NXW2 375 aaKnown RBP21.96■■□□□ 1.11
LSM4-202ENST00000593564 TNPO3Q9Y5L0 923 aaKnown RBP21.96■■□□□ 1.11
LSM4-202ENST00000593564 AKAP6Q13023 2319 aa21.96■■□□□ 1.11
LSM4-202ENST00000593564 C2orf92A0A1B0GVN3 265 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 HMX2A2RU54 273 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 CAPN14A8MX76 684 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 TP53I11O14683 189 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 GDF1P27539 372 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 TRPC1P48995 793 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 RPS6KA2Q15349 733 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 TRADDQ15628 312 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 ZZZ3Q8IYH5 903 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 DIO2Q92813 273 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 NINJ1Q92982 152 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 CXorf21Q9HAI6 301 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 RNF11Q9Y3C5 154 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 IKBKGQ9Y6K9 419 aa21.95■■□□□ 1.1
LSM4-202ENST00000593564 NCKAP5O14513 1909 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 NINQ8N4C6 2090 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 AHRRA9YTQ3 701 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 SYT5O00445 386 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 SEMA3DO95025 777 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 KLHL2O95198 593 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 SSTR4P31391 388 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 KIR2DL3P43628 341 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 NEK2P51955 445 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 IST1P53990 364 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 DUSP8Q13202 625 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 TMEM198Q66K66 360 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 KLC3Q6P597 504 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 UCN3Q969E3 161 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 GPR78Q96P69 363 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 SECISBP2Q96T21 854 aaKnown RBP21.94■■□□□ 1.1
LSM4-202ENST00000593564 SERPINI1Q99574 410 aa21.94■■□□□ 1.1
LSM4-202ENST00000593564 A0A096LPK6 155 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 C15orf38-AP3S2A0A0A6YYH1 394 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 SIX3O95343 332 aaPredicted RBP21.93■■□□□ 1.1
LSM4-202ENST00000593564 GBAP04062 536 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 FBXW4P57775 412 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 CRYZQ08257 329 aaKnown RBP21.93■■□□□ 1.1
LSM4-202ENST00000593564 FUT7Q11130 342 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 ACSF3Q4G176 576 aaPredicted RBP21.93■■□□□ 1.1
LSM4-202ENST00000593564 TMEM64Q6YI46 380 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 GALNT12Q8IXK2 581 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 RELL2Q8NC24 303 aaPredicted RBP21.93■■□□□ 1.1
LSM4-202ENST00000593564 SPPL2AQ8TCT8 520 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 FOXC2Q99958 501 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 CXXC4Q9H2H0 198 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 CPSF2Q9P2I0 782 aaKnown RBP21.93■■□□□ 1.1
LSM4-202ENST00000593564 NPFFR2Q9Y5X5 522 aa21.93■■□□□ 1.1
LSM4-202ENST00000593564 A0A1W2PS29 197 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 DVL2O14641 736 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 PGRMC2O15173 223 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 SNX4O95219 450 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 CLDN9O95484 217 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 EPPINO95925 133 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 PIK3R1P27986 724 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 CEACAM8P31997 349 aaPredicted RBP21.92■■□□□ 1.1
LSM4-202ENST00000593564 TMED10P49755 219 aaKnown RBP21.92■■□□□ 1.1
LSM4-202ENST00000593564 CDK9P50750 372 aaKnown RBP21.92■■□□□ 1.1
LSM4-202ENST00000593564 SNTB1Q13884 538 aaKnown RBP21.92■■□□□ 1.1
LSM4-202ENST00000593564 HLA-DQA1Q5Y7H0 255 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 ZNF615Q8N8J6 731 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 NAXEQ8NCW5 288 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 RILPQ96NA2 401 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 TIMP4Q99727 224 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 ANGPTL4Q9BY76 406 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 POLDIP3Q9BY77 421 aaKnown RBP21.92■■□□□ 1.1
LSM4-202ENST00000593564 UBQLN3Q9H347 655 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 TEX10Q9NXF1 929 aaPredicted RBP21.92■■□□□ 1.1
LSM4-202ENST00000593564 CRIM1Q9NZV1 1036 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 ARHGAP21Q5T5U3 1957 aa21.92■■□□□ 1.1
LSM4-202ENST00000593564 MAP1AP78559 2803 aaPredicted RBP21.92■■□□□ 1.1
LSM4-202ENST00000593564 FAM221AA4D161 298 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 ALDOAP04075 364 aaKnown RBP21.91■■□□□ 1.1
LSM4-202ENST00000593564 HPNP05981 417 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 BMP5P22003 454 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 UQCRC1P31930 480 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 TIMP3P35625 211 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 ASCL1P50553 236 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 NRG3P56975 720 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 FBXL19-AS1Q494R0 122 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 FNDC7Q5VTL7 733 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 BICRALQ6AI39 1079 aa21.91■■□□□ 1.1
LSM4-202ENST00000593564 LACC1Q8IV20 430 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms