RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SLC22A8Q8TCC7 542 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 TMEM109Q9BVC6 243 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 IQCGQ9H095 443 aaKnown RBP25.18■■□□□ 1.62
SMAD4-213ENST00000591914 RYDENQ9NUL5 291 aaKnown RBP25.18■■□□□ 1.62
SMAD4-213ENST00000591914 SIRT5Q9NXA8 310 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 PSME2Q9UL46 239 aa25.18■■□□□ 1.62
SMAD4-213ENST00000591914 ATP1B1P05026 303 aa25.17■■□□□ 1.62
SMAD4-213ENST00000591914 DEKP35659 375 aaKnown RBP25.17■■□□□ 1.62
SMAD4-213ENST00000591914 PER3P56645 1201 aa25.17■■□□□ 1.62
SMAD4-213ENST00000591914 ZNF791Q3KP31 576 aaPredicted RBP25.17■■□□□ 1.62
SMAD4-213ENST00000591914 TRIM46Q7Z4K8 759 aa25.17■■□□□ 1.62
SMAD4-213ENST00000591914 GAL3ST4Q96RP7 486 aa25.17■■□□□ 1.62
SMAD4-213ENST00000591914 PLEKHB1Q9UF11 243 aaPredicted RBP25.17■■□□□ 1.62
SMAD4-213ENST00000591914 ZNF835Q9Y2P0 537 aa25.17■■□□□ 1.62
SMAD4-213ENST00000591914 SLC19A2O60779 497 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 ERAL1O75616 437 aaKnown RBP25.16■■□□□ 1.62
SMAD4-213ENST00000591914 CSNK2A2P19784 350 aaPredicted RBP25.16■■□□□ 1.62
SMAD4-213ENST00000591914 NT5EP21589 574 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 TIA1P31483 386 aaKnown RBP eCLIP25.16■■□□□ 1.62
SMAD4-213ENST00000591914 RFC3P40938 356 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 LYPD8Q6UX82 237 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 BNC2Q6ZN30 1099 aaPredicted RBP25.16■■□□□ 1.62
SMAD4-213ENST00000591914 FJX1Q86VR8 437 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 ZNF615Q8N8J6 731 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 ZNF441Q8N8Z8 693 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 KLHL29Q96CT2 875 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 HEY2Q9UBP5 337 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 RAB21Q9UL25 225 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 DLGAP4Q9Y2H0 992 aa25.16■■□□□ 1.62
SMAD4-213ENST00000591914 DIDO1Q9BTC0 2240 aaKnown RBP25.16■■□□□ 1.62
SMAD4-213ENST00000591914 GNG14A0A1W2PPG7 69 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 TRIM13O60858 407 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 CRCPO75575 148 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 IL3P08700 152 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 UROSP10746 265 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 DRD2P14416 443 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 S1PR1P21453 382 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 FEN1P39748 380 aaKnown RBP25.15■■□□□ 1.62
SMAD4-213ENST00000591914 CA7P43166 264 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 ALDH9A1P49189 494 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 PRICKLE4Q2TBC4 344 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 GHDCQ8N2G8 530 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 OR2M7Q8NG81 312 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 OR7G1Q8NGA0 311 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 CNRIP1Q96F85 164 aaPredicted RBP25.15■■□□□ 1.62
SMAD4-213ENST00000591914 ZNF681Q96N22 645 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 TRMOQ9BU70 441 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 GATA5Q9BWX5 397 aaPredicted RBP25.15■■□□□ 1.62
SMAD4-213ENST00000591914 SHCBP1LQ9BZQ2 653 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 SH2D2AQ9NP31 389 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 SLC17A7Q9P2U7 560 aa25.15■■□□□ 1.62
SMAD4-213ENST00000591914 TRGV8A0A0C4DH27 118 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 A0A0G2JMM0 328 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 A0A1W2PPB8 328 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 A0A1W2PRS3 328 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 PINLYPA6NC86 204 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 KIR3DP1A8MWS1 328 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 TFECO14948 347 aaPredicted RBP25.14■■□□□ 1.62
SMAD4-213ENST00000591914 SERPINB3P29508 390 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 GSTM5P46439 218 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 BTKQ06187 659 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 MGAT2Q10469 447 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 MAP4K2Q12851 820 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 SPDYAQ5MJ70 313 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 C6orf163Q5TEZ5 329 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 Q6ZPB1 254 aaPredicted RBP25.14■■□□□ 1.62
SMAD4-213ENST00000591914 CHERPQ8IWX8 916 aaKnown RBP25.14■■□□□ 1.62
SMAD4-213ENST00000591914 DND1Q8IYX4 353 aaKnown RBP25.14■■□□□ 1.62
SMAD4-213ENST00000591914 VWA5B2Q8N398 1253 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 C16orf78Q8WTQ4 265 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 TP53INP1Q96A56 240 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 SPACA9Q96E40 222 aaPredicted RBP25.14■■□□□ 1.62
SMAD4-213ENST00000591914 MAGED4Q96JG8 741 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 FAM111AQ96PZ2 611 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 OR10A5Q9H207 317 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 MAT2BQ9NZL9 334 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 UTS2RQ9UKP6 389 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 ZNF780BQ9Y6R6 833 aa25.14■■□□□ 1.62
SMAD4-213ENST00000591914 C2orf92A0A1B0GVN3 265 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 SPAG7O75391 227 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 FBXO45P0C2W1 286 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 CCL3P10147 92 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 CNR1P21554 472 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 SOX18P35713 384 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 DUSP2Q05923 314 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 HEPACAMQ14CZ8 416 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 IMPG1Q17R60 797 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 CMPK2Q5EBM0 449 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 SPPL2CQ8IUH8 684 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 LRRC25Q8N386 305 aaPredicted RBP25.13■■□□□ 1.61
SMAD4-213ENST00000591914 SMC6Q96SB8 1091 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 FAM173AQ9BQD7 235 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 EBPLQ9BY08 206 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 SACM1LQ9NTJ5 587 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 ZNF639Q9UID6 485 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 CCL27Q9Y4X3 112 aa25.13■■□□□ 1.61
SMAD4-213ENST00000591914 A1L4Q6 167 aa25.12■■□□□ 1.61
SMAD4-213ENST00000591914 HS6ST1O60243 411 aa25.12■■□□□ 1.61
SMAD4-213ENST00000591914 RSL1D1O76021 490 aaKnown RBP25.12■■□□□ 1.61
SMAD4-213ENST00000591914 CLDN1O95832 211 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms