RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ATP1B1P05026 303 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 BPGMP07738 259 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 FGF4P08620 206 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 CT62P0C5K7 136 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 CSNK2A2P19784 350 aaPredicted RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 NT5EP21589 574 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 MST1P26927 711 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 SSTR4P31391 388 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 GSTM5P46439 218 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 TDGF1P3P51864 188 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF763Q0D2J5 394 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 FUT7Q11130 342 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 HEPACAMQ14CZ8 416 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 TNFAIP8L3Q5GJ75 292 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 FHL5Q5TD97 284 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 C6orf163Q5TEZ5 329 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 NOXRED1Q6NXP6 359 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 FAM180BQ6P0A1 224 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 LRIG3Q6UXM1 1119 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 SLC29A4Q7RTT9 530 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 CROCCP2Q86T23 111 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 SULF2Q8IWU5 870 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 VWA5B2Q8N398 1253 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 CPSF7Q8N684 471 aaKnown RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 FAM98AQ8NCA5 519 aaKnown RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 FAM76AQ8TAV0 307 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 KLHL29Q96CT2 875 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 CNRIP1Q96F85 164 aaPredicted RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 PGM2Q96G03 612 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 METTL2AQ96IZ6 378 aaKnown RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF681Q96N22 645 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 FRMD6Q96NE9 622 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 WWTR1Q9GZV5 400 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 TUBB1Q9H4B7 451 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 EML4Q9HC35 981 aaKnown RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 SSU72Q9NP77 194 aaKnown RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 TIMMDC1Q9NPL8 285 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 UTS2RQ9UKP6 389 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 KLF13Q9Y2Y9 288 aaPredicted RBP8.51□□□□□ -1.05
DNMT1-223ENST00000591239 FIS1Q9Y3D6 152 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 TRAF6Q9Y4K3 522 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 DNAJC15Q9Y5T4 150 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 PTGDR2Q9Y5Y4 395 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF780BQ9Y6R6 833 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 POLEQ07864 2286 aa8.51□□□□□ -1.05
DNMT1-223ENST00000591239 HIVEP3Q5T1R4 2406 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 TMEM233B4DJY2 109 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 KLRC4-KLRK1H3BQV0 150 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SLC28A1O00337 649 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 TM9SF1O15321 606 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 RGS14O43566 566 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 PEX1O43933 1283 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SEMA7AO75326 666 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SEC22BO75396 215 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 AGFG2O95081 481 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 LINC00032P0C843 101 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 S1PR1P21453 382 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 PRPH2P23942 346 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 ARRB2P32121 409 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 PTGER1P34995 402 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SERPINB5P36952 375 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SERPINB4P48594 390 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 KCNK10P57789 538 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 GPR85P60893 370 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 ALDH6A1Q02252 535 aaKnown RBP8.5□□□□□ -1.05
DNMT1-223ENST00000591239 DUSP2Q05923 314 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 C2orf80Q0P641 193 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 MGAT2Q10469 447 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 MAP4K2Q12851 820 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 KIAA0040Q15053 153 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 EBPQ15125 230 aaKnown RBP8.5□□□□□ -1.05
DNMT1-223ENST00000591239 PRICKLE4Q2TBC4 344 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 UGT3A2Q3SY77 523 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SH2D4BQ5SQS7 431 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 BEND6Q5SZJ8 279 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-223ENST00000591239 KANK2Q63ZY3 851 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 OPN5Q6U736 354 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 GFRALQ6UXV0 394 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 RNF165Q6ZSG1 346 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 Q6ZSR9 355 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 NUDCD3Q8IVD9 361 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 HOMEZQ8IX15 550 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 CCDC116Q8IYX3 515 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SAMD14Q8IZD0 417 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-223ENST00000591239 CLYBLQ8N0X4 340 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 LRRC25Q8N386 305 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SLC15A4Q8N697 577 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF615Q8N8J6 731 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 PSD4Q8NDX1 1056 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 ADCY4Q8NFM4 1077 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 OR7G1Q8NGA0 311 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 OR6Y1Q8NGX8 325 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 OR2T11Q8NH01 316 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 CDC26Q8NHZ8 85 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SLC22A8Q8TCC7 542 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 AGR3Q8TD06 166 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 EXOSC8Q96B26 276 aaKnown RBP8.5□□□□□ -1.05
DNMT1-223ENST00000591239 PKNOX2Q96KN3 472 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SGCZQ96LD1 299 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms