RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CBFA2T3O75081 653 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 FHP07954 510 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 HNRNPCL4P0DMR1 293 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 PRR5P85299 388 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 ST3GAL4Q11206 333 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 ZNF425Q6IV72 752 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 USP30Q70CQ3 517 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 ZBTB46Q86UZ6 589 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 AMIGO1Q86WK6 493 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 FBXL6Q8N531 539 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 VANGL1Q8TAA9 524 aaPredicted RBP18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 ZNF675Q8TD23 568 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 SLC22A18Q96BI1 424 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 ZHX1-C8orf76Q96EF9 292 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 COX4I2Q96KJ9 171 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 C3orf14Q9HBI5 128 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 FGF22Q9HCT0 170 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 AMBNQ9NP70 447 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 SPHK1Q9NYA1 384 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 GPR83Q9NYM4 423 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 ATG4BQ9Y4P1 393 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 TICRRQ7Z2Z1 1910 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 EPOPA6NHQ4 379 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 J3QRK9 145 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 AXIN1O15169 862 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 UGT2B17O75795 530 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 STSP08842 583 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 POU1F1P28069 291 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 PEBP1P30086 187 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 MPIP34949 423 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 CNR2P34972 360 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 NUDT6P53370 316 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 SNRPGP62308 76 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 SLC48A1Q6P1K1 146 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 FAM20CQ8IXL6 584 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 IL17RCQ8NAC3 791 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 SUN3Q8TAQ9 357 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 SIPA1Q96FS4 1042 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 FBXO8Q9NRD0 319 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 SCHIP1Q9P0W5 487 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 FBXW2Q9UKT8 454 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 ATG2BQ96BY7 2078 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 PGRMC2O15173 223 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 EMC8O43402 210 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 AIREO43918 545 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 SLITRK5O94991 958 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 KLF8O95600 359 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 AIFM1O95831 613 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 CHRM5P08912 532 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 PRKAG1P54619 331 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 NCS1P62166 190 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 RPS15AP62244 130 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 IRF3Q14653 427 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 RAB30Q15771 203 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 NDUFA9Q16795 377 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 TJAP1Q5JTD0 557 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 ZNF367Q7RTV3 350 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 B3GNT7Q8NFL0 401 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 OR5D16Q8NGK9 328 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 FNDC11Q9BVV2 318 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 SLC6A17Q9H1V8 727 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 SLC28A3Q9HAS3 691 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 AKIP1Q9NQ31 210 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 REV1Q9UBZ9 1251 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 ERGIC3Q9Y282 383 aa18.09■□□□□ 0.49
PRKCSH-209ENST00000589838 A0A1W2PQF6 199 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 A0A1W2PRQ8 180 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 PRAMEF27A3QJZ7 478 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 GLOD5A6NK44 160 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 M0R082 166 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 TLR4O00206 839 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 CASC3O15234 703 aaKnown RBP18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 ZW10O43264 779 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 APBB3O95704 486 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 PIPP12273 146 aaPredicted RBP18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 CD72P21854 359 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 ALDH4A1P30038 563 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 LIPAP38571 399 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 RGS1Q08116 209 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 COX10Q12887 443 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 FOXD4Q12950 439 aaPredicted RBP18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 NFATC4Q14934 902 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 SYT16Q17RD7 645 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 RGS21Q2M5E4 152 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 SLX4IPQ5VYV7 408 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 ENPP7Q6UWV6 458 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 SLC46A3Q7Z3Q1 461 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 CCDC116Q8IYX3 515 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 NR4A3Q92570 626 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 WDR92Q96MX6 357 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 MACROD1Q9BQ69 325 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 CDCA4Q9BXL8 241 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 ROGDIQ9GZN7 287 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 POLR2J3Q9H1A7 115 aaKnown RBP18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 CALML5Q9NZT1 146 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 SELENONQ9NZV5 590 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 NDOR1Q9UHB4 597 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 CES1P1Q9UKY3 287 aa18.08■□□□□ 0.49
PRKCSH-209ENST00000589838 CORINQ9Y5Q5 1042 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms