RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ATP6V0D1P61421 351 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 OLR1P78380 273 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 VLDLRP98155 873 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 OCRLQ01968 901 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 PRDX1Q06830 199 aaKnown RBP5.56□□□□□ -1.52
VPS25-204ENST00000589577 ZNF844Q08AG5 666 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ASPHQ12797 758 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 DUSP8Q13202 625 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 BMPR2Q13873 1038 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SEMA3AQ14563 771 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 RTL4Q6ZR62 310 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 QSOX2Q6ZRP7 698 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ZNF550Q7Z398 422 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ADAMTSL2Q86TH1 951 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 KRT222Q8N1A0 295 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ARFGAP2Q8N6H7 521 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ZNF611Q8N823 705 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 GOLM1Q8NBJ4 401 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 OR2W6PQ8NHA6 318 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 MCOLN3Q8TDD5 553 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 DCAKDQ8WVC6 231 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ASB15Q8WXK1 588 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ANKRD7Q92527 254 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 NCLNQ969V3 563 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ANKRD9Q96BM1 317 aaPredicted RBP5.56□□□□□ -1.52
VPS25-204ENST00000589577 TBC1D20Q96BZ9 403 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 FAM136AQ96C01 138 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 TM4SF19Q96DZ7 209 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ZMYND19Q96E35 227 aaPredicted RBP5.56□□□□□ -1.52
VPS25-204ENST00000589577 LINGO1Q96FE5 620 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 PGM2Q96G03 612 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 PTCHD1Q96NR3 888 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 GPR21Q99679 349 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SFXN3Q9BWM7 321 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 P2RY12Q9H244 342 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ANKHQ9HCJ1 492 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SMYD2Q9NRG4 433 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SNX15Q9NRS6 342 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ZNF226Q9NYT6 803 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SPATA7Q9P0W8 599 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ARMCX1Q9P291 453 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SLC17A6Q9P2U8 582 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 MYOTQ9UBF9 498 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 CTNNAL1Q9UBT7 734 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 LGALS13Q9UHV8 139 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 GRID1Q9ULK0 1009 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 DTX4Q9Y2E6 619 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 DHRS7Q9Y394 339 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 CLDN16Q9Y5I7 305 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 ACTL7BQ9Y614 415 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.56□□□□□ -1.52
VPS25-204ENST00000589577 CMYA5Q8N3K9 4069 aa5.56□□□□□ -1.52
VPS25-204ENST00000589577 KCNE1BA0A087WTH5 132 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 C15orf38-AP3S2A0A0A6YYH1 394 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 SLC35F4A4IF30 521 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 LRRC14BA6NHZ5 514 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 HS3ST1O14792 307 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 PHGDHO43175 533 aaKnown RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 CHST10O43529 356 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 GALR3O60755 368 aaPredicted RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 SMIM24O75264 130 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 TNFSF13O75888 250 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 MATN4O95460 622 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 C8GP07360 202 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 GSTA1P08263 222 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 ENO2P09104 434 aaPredicted RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 RBP1P09455 135 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 CCDC166P0CW27 439 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 MPC1LP0DKB6 136 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 ZNF37AP17032 561 aaPredicted RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 KRT4P19013 534 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 RPA3P35244 121 aaPredicted RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 IDUAP35475 653 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 CDKN1AP38936 164 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 HK2P52789 917 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 TAS2R39P59534 338 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 TAP2Q03519 686 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 SP140Q13342 867 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 CSHL1Q14406 222 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 TERF2Q15554 542 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 PDCD2Q16342 344 aaPredicted RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 CCDC153Q494R4 210 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 CTSL3PQ5NE16 218 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 FAM120AOSQ5T036 256 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 RBM20Q5T481 1227 aaKnown RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 AGBL2Q5U5Z8 902 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 LIPNQ5VXI9 398 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 ZNF704Q6ZNC4 412 aaPredicted RBP5.55□□□□□ -1.52
VPS25-204ENST00000589577 TIFABQ6ZNK6 161 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 BTLAQ7Z6A9 289 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 GCNT2Q8N0V5 402 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 AFAP1L2Q8N4X5 818 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 PPFIBP2Q8ND30 876 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 STAG3L4Q8TBR4 150 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 DYDC1Q8WWB3 177 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 ATL1Q8WXF7 558 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 SMPDL3AQ92484 453 aa5.55□□□□□ -1.52
VPS25-204ENST00000589577 VMP1Q96GC9 406 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms