RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 DYRK3O43781 588 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 FAM155BO75949 473 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 GPR75O95800 540 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 AIFM1O95831 613 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 S100BP04271 92 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-204ENST00000588687 GALNSP34059 522 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 CDK9P50750 372 aaKnown RBP16.86■□□□□ 0.29
CCDC43-204ENST00000588687 FBXW4P57775 412 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 GPX6P59796 221 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 DDX39BQ13838 428 aaKnown RBP16.86■□□□□ 0.29
CCDC43-204ENST00000588687 NHSL2Q5HYW2 709 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 TBCELQ5QJ74 424 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 NSUN5P2Q63ZY6 315 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 VASNQ6EMK4 673 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 MAATS1Q7Z4T9 603 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 LIX1Q8N485 282 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 STAG3L4Q8TBR4 150 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 SPPL2AQ8TCT8 520 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 JSRP1Q96MG2 331 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-204ENST00000588687 RILPQ96NA2 401 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 MTERF1Q99551 399 aaKnown RBP16.86■□□□□ 0.29
CCDC43-204ENST00000588687 KCNF1Q9H3M0 494 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 PLEKHF2Q9H8W4 249 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 JKAMPQ9P055 326 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 ADGRE2Q9UHX3 823 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 FOXD3Q9UJU5 478 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-204ENST00000588687 C15orf41Q9Y2V0 281 aa16.86■□□□□ 0.29
CCDC43-204ENST00000588687 IQANK1A0A1B0GTG1 560 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 MBD3L4A6NDZ8 208 aaPredicted RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 MBD3L3A6NE82 208 aaPredicted RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 MBD3L5A6NJ08 208 aaPredicted RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 GLOD5A6NK44 160 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 NR2F6P10588 404 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 SSTR4P31391 388 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 BUD31P41223 144 aaPredicted RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 RAP1GDS1P52306 607 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 RPS13P62277 151 aaKnown RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 CAMKMTQ7Z624 323 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 CENPLQ8N0S6 344 aaPredicted RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 WFDC11Q8NEX6 87 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 MBD3L2Q8NHZ7 208 aaPredicted RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 PYROXD1Q8WU10 500 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 CDKL2Q92772 493 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 DIO2Q92813 273 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 RIT1Q92963 219 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 ANGPTL4Q9BY76 406 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 DDX31Q9H8H2 851 aaKnown RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 CXorf21Q9HAI6 301 aa16.85■□□□□ 0.29
CCDC43-204ENST00000588687 LYARQ9NX58 379 aaKnown RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 MTRF1LQ9UGC7 380 aaKnown RBP16.85■□□□□ 0.29
CCDC43-204ENST00000588687 A0A1W2PPR1 153 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 CD8B2A6NJW9 211 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 SUPT3HB4E1H0 165 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 H0YIV9 168 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 CCDC188H7C350 402 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 ZSCAN12O43309 604 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 OR10H2O60403 315 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 SUPT3HO75486 399 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 RAF1P04049 648 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 CT62P0C5K7 136 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 SLC35E2P0CK97 266 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 EPB42P16452 691 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 SOX18P35713 384 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 MRPS25P82663 173 aaKnown RBP16.84■□□□□ 0.29
CCDC43-204ENST00000588687 SORDQ00796 357 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 FUT7Q11130 342 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 DEFB113Q30KQ7 82 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 ZNF615Q8N8J6 731 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 GOT1L1Q8NHS2 421 aaPredicted RBP16.84■□□□□ 0.29
CCDC43-204ENST00000588687 ADIPOR1Q96A54 375 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 TP53INP1Q96A56 240 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 HSPBAP1Q96EW2 488 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 WDYHV1Q96HA8 205 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 SECISBP2Q96T21 854 aaKnown RBP16.84■□□□□ 0.29
CCDC43-204ENST00000588687 UGT2B28Q9BY64 529 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 SAYSD1Q9NPB0 183 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 GRHL1Q9NZI5 618 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 TXNDC16Q9P2K2 825 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 SLC6A5Q9Y345 797 aa16.84■□□□□ 0.29
CCDC43-204ENST00000588687 C2orf92A0A1B0GVN3 265 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 SNX4O95219 450 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 FAM58BPP0C7Q3 252 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 EPXP11678 715 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 TLX1P31314 330 aaPredicted RBP16.83■□□□□ 0.28
CCDC43-204ENST00000588687 CASP3P42574 277 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 DGKQP52824 942 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 CUL3Q13618 768 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 SETDB1Q15047 1291 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 TMEM198Q66K66 360 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 PM20D2Q8IYS1 436 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 TAGAPQ8N103 731 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 TEX9Q8N6V9 391 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 WDR20Q8TBZ3 569 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 GNRHR2Q96P88 292 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 SNX15Q9NRS6 342 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 TEX10Q9NXF1 929 aaPredicted RBP16.83■□□□□ 0.28
CCDC43-204ENST00000588687 DTX4Q9Y2E6 619 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 NPFFR2Q9Y5X5 522 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 FBN3Q75N90 2809 aa16.83■□□□□ 0.28
CCDC43-204ENST00000588687 TUBAL3A6NHL2 446 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms