RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 GABRR3A8MPY1 467 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 S1PR1P21453 382 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 NT5EP21589 574 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 SLC37A1P57057 533 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 FUT7Q11130 342 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 TUBA3CQ13748 450 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 PRICKLE4Q2TBC4 344 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 TUBA3EQ6PEY2 450 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 PRICKLE2Q7Z3G6 844 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 GALNT12Q8IXK2 581 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 LRRC25Q8N386 305 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-207ENST00000588542 TUBGCP3Q96CW5 907 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 PPP1R36Q96LQ0 422 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 TSSK3Q96PN8 268 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 PFDN4Q9NQP4 134 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 TAS2R7Q9NYW3 318 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 MAT2BQ9NZL9 334 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 SHANK1Q9Y566 2161 aa18.76■□□□□ 0.59
DDX39A-207ENST00000588542 SSTR4P31391 388 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 CD96P40200 585 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 MAP4K2Q12851 820 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF169Q14929 603 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-207ENST00000588542 TLR1Q15399 786 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 LTB4RQ15722 352 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 FAM111BQ6SJ93 734 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 CCDC116Q8IYX3 515 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF615Q8N8J6 731 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 ADCY4Q8NFM4 1077 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 CLHC1Q8NHS4 586 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 SUN3Q8TAQ9 357 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 GFM2Q969S9 779 aaKnown RBP18.75■□□□□ 0.59
DDX39A-207ENST00000588542 CTHRC1Q96CG8 243 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 SIGLEC12Q96PQ1 595 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 C1orf50Q9BV19 199 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 NUF2Q9BZD4 464 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 ACBD3Q9H3P7 528 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 AKTIPQ9H8T0 292 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 MIEF1Q9NQG6 463 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 ANKRD10Q9NXR5 420 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 ABI3Q9P2A4 366 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 MYOTQ9UBF9 498 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF639Q9UID6 485 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 PCDHGA10Q9Y5H3 936 aa18.75■□□□□ 0.59
DDX39A-207ENST00000588542 EXPH5Q8NEV8 1989 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 MYO1GB0I1T2 1018 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 CDK2AP1O14519 115 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 SLC28A2O43868 658 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 ITGA10O75578 1167 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 LRATO95237 230 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 TRHRP34981 398 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-207ENST00000588542 IL23RQ5VWK5 629 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 RNF111Q6ZNA4 994 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF605Q86T29 641 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF227Q86WZ6 799 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 SAMD14Q8IZD0 417 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-207ENST00000588542 LIX1Q8N485 282 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 FNDC5Q8NAU1 212 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 MDS2Q8NDY4 140 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 SIMC1Q8NDZ2 872 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 UTP23Q9BRU9 249 aaKnown RBP18.74■□□□□ 0.59
DDX39A-207ENST00000588542 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.74■□□□□ 0.594e-7■□□□□ 10.9
DDX39A-207ENST00000588542 TRIM45Q9H8W5 580 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-207ENST00000588542 MEAF6Q9HAF1 191 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 SLAMF7Q9NQ25 335 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 ENTPD4Q9Y227 616 aa18.74■□□□□ 0.59
DDX39A-207ENST00000588542 OR6C76A6NM76 312 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 WWP2O00308 870 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 FCHO1O14526 889 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 AKAP10O43572 662 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF354AO60765 605 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-207ENST00000588542 TBX19O60806 448 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 OR2J2O76002 312 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 NEURL1O76050 574 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 MAPK1P28482 360 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 ASMTP46597 345 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 MLLT10P55197 1068 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 EMX2Q04743 252 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 DUSP8Q13202 625 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 PDE7AQ13946 482 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 EBPQ15125 230 aaKnown RBP18.73■□□□□ 0.59
DDX39A-207ENST00000588542 MPEG1Q2M385 716 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 SMU1Q2TAY7 513 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF385BQ569K4 471 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF628Q5EBL2 1059 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 ANKRD26P1Q6NSI1 321 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 VWA5B2Q8N398 1253 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 OR5L2Q8NGL0 311 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 NUBPLQ8TB37 319 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF675Q8TD23 568 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 ZNF764Q96H86 408 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-207ENST00000588542 BRINP2Q9C0B6 783 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 OR10A5Q9H207 317 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 REEP4Q9H6H4 257 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 GIMAP4Q9NUV9 329 aa18.73■□□□□ 0.59
DDX39A-207ENST00000588542 INTS9Q9NV88 658 aaKnown RBP18.73■□□□□ 0.59
DDX39A-207ENST00000588542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.73■□□□□ 0.59
DDX39A-207ENST00000588542 MARCOQ9UEW3 520 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-207ENST00000588542 YARS2Q9Y2Z4 477 aaKnown RBP18.73■□□□□ 0.59
DDX39A-207ENST00000588542 TRAV17A0A0B4J275 112 aa18.72■□□□□ 0.59
DDX39A-207ENST00000588542 SDHDO14521 159 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms