RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 RMI1Q9H9A7 625 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 BCL2L10Q9HD36 194 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 AASSQ9UDR5 926 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 SEC14L3Q9UDX4 400 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 DOLKQ9UPQ8 538 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 KLHL20Q9Y2M5 609 aa13.32□□□□□ -0.28
NEDD4L-223ENST00000588516 LOC100506127A0A0U1RQW1 187 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 HIDE1A8MVS5 230 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 PLPP1O14494 284 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 HAT1O14929 419 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 CASC3O15234 703 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 SLC28A2O43868 658 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 UGT2B17O75795 530 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 GASTP01350 101 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 C1QCP02747 245 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 SCG5P05408 212 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ACADMP11310 421 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ENDOUP21128 410 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 PSMA1P25786 263 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 CNR2P34972 360 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 TSFMP43897 325 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 SLC15A1P46059 708 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 EIF2B2P49770 351 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 XKP51811 444 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 CRISP3P54108 245 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 PCBP4P57723 403 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ABATP80404 500 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 TGM3Q08188 693 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 NFE2L1Q14494 772 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 AGERQ15109 404 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 MED22Q15528 200 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 POM121L1PQ3SYA9 428 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 C12orf73Q69YU5 71 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ZNF770Q6IQ21 691 aaPredicted RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ADNP2Q6IQ32 1131 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 GRASPQ7Z6J2 395 aaPredicted RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 SLC22A16Q86VW1 577 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ZNF547Q8IVP9 402 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ETFBKMTQ8IXQ9 262 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 PROKR2Q8NFJ6 384 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 OR9Q2Q8NGE9 314 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 OR5AK3PQ8NH89 298 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 WDR36Q8NI36 951 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 CHAC2Q8WUX2 184 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 RPL3LQ92901 407 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 FOXJ1Q92949 421 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 TMEM19Q96HH6 336 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 FNDC11Q9BVV2 318 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 DDX31Q9H8H2 851 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 SLC25A19Q9HC21 320 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ZBTB20Q9HC78 741 aaPredicted RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 MOV10Q9HCE1 1003 aaKnown RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ISYNA1Q9NPH2 558 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 GIMAP4Q9NUV9 329 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 RLIMQ9NVW2 624 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ACSL6Q9UKU0 697 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ACAD8Q9UKU7 415 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 PNMA8BQ9ULN7 279 aaPredicted RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ITM2BQ9Y287 266 aa13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.31□□□□□ -0.28
NEDD4L-223ENST00000588516 MAP1BP46821 2468 aaKnown RBP13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 A0A0G2JPF8 293 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 A0A1W2PRQ8 180 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 HNRNPCL2B2RXH8 293 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 HNRNPCL3B7ZW38 293 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 NRG2O14511 850 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 SPINT1O43278 529 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 OR10H3O60404 316 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 KLHL18O94889 574 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 GBAP04062 536 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 BCHEP06276 602 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 HSMCR30P0CW71 290 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 HNRNPCL4P0DMR1 293 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 NR2F1P10589 423 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 CEBPBP17676 345 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 SDHBP21912 280 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 POU1F1P28069 291 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 GPC1P35052 558 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 DMPKQ09013 629 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 COL9A2Q14055 689 aaPredicted RBP13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 ATAT1Q5SQI0 421 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 OR4C11Q6IEV9 310 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 VN1R5Q7Z5H4 357 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 TRIM74Q86UV6 250 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 TRIM73Q86UV7 250 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 LYSMD2Q8IV50 215 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 HORMAD2Q8N7B1 307 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 POC5Q8NA72 575 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 OR56A1Q8NGH5 318 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 TMCO6Q96DC7 493 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 POLDIP3Q9BY77 421 aaKnown RBP13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 CACYBPQ9HB71 228 aaKnown RBP13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 ABCB10Q9NRK6 738 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 TMEM184CQ9NVA4 438 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 NPAP1Q9NZP6 1156 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 TAC3Q9UHF0 121 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 SLC13A4Q9UKG4 626 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 SSR3Q9UNL2 185 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 SH2B3Q9UQQ2 575 aa13.3□□□□□ -0.28
NEDD4L-223ENST00000588516 TRAPPC4Q9Y296 219 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms