RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SPNS1Q9H2V7 528 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 ANKRA2Q9H9E1 313 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 TXNL4BQ9NX01 149 aaKnown RBP17.61■□□□□ 0.41
DDX39A-206ENST00000587730 CLEC2DQ9UHP7 191 aa17.61■□□□□ 0.41
DDX39A-206ENST00000587730 HELZP42694 1942 aaKnown RBP17.6■□□□□ 0.41
DDX39A-206ENST00000587730 FAM25AB3EWG3 89 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 FAM25CB3EWG5 89 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 FAM25GB3EWG6 89 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 ANHXE9PGG2 379 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 CASC3O15234 703 aaKnown RBP17.6■□□□□ 0.41
DDX39A-206ENST00000587730 EFCAB14O75071 495 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 POP7O75817 140 aaKnown RBP17.6■□□□□ 0.41
DDX39A-206ENST00000587730 SOX14O95416 240 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 CA8P35219 290 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 BSGP35613 385 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 RFX2P48378 723 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 KHKP50053 298 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 CCR8P51685 355 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 SYT14P1Q58G82 188 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 IER5LQ5T953 404 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 TMEM215Q68D42 235 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 METAP1DQ6UB28 335 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-206ENST00000587730 FAM83HQ6ZRV2 1179 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-206ENST00000587730 SPATC1Q76KD6 591 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 LAX1Q8IWV1 398 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 ASCC1Q8N9N2 400 aaKnown RBP17.6■□□□□ 0.41
DDX39A-206ENST00000587730 OR52I1Q8NGK6 324 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 SLC7A13Q8TCU3 470 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 RGMAQ96B86 450 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 ARMC5Q96C12 935 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 TOX2Q96NM4 488 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 TREX2Q9BQ50 279 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-206ENST00000587730 TMEM121BQ9BXQ6 578 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-206ENST00000587730 ZDHHC5Q9C0B5 715 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 TVP23BQ9NYZ1 205 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 ASF1AQ9Y294 204 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 PCM1Q15154 2024 aa17.6■□□□□ 0.41
DDX39A-206ENST00000587730 ALPK3Q96L96 1907 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 A0A1W2PQ09 198 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 MEIOCA2RUB1 952 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 FABP12A6NFH5 140 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 HEPACAM2A8MVW5 462 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 HCN1O60741 890 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 SOD1P00441 154 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 ACP2P11117 423 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 ZNF24P17028 368 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 SDC2P34741 201 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 MLLT3P42568 568 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-206ENST00000587730 GIPRP48546 466 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 CCT3P49368 545 aaKnown RBP17.59■□□□□ 0.41
DDX39A-206ENST00000587730 PPP3R1P63098 170 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 MEF2AQ02078 507 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-206ENST00000587730 GRIN2CQ14957 1233 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 CDK10Q15131 360 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 THOC7Q6I9Y2 204 aaKnown RBP17.59■□□□□ 0.41
DDX39A-206ENST00000587730 C1orf94Q6P1W5 598 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 RDH10Q8IZV5 341 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 VWA5B2Q8N398 1253 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 CYB5D2Q8WUJ1 264 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 PRRC1Q96M27 445 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 SLC6A18Q96N87 628 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 TEX12Q9BXU0 123 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 ZNF717Q9BY31 904 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-206ENST00000587730 MUTYHQ9UIF7 546 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 A4GNTQ9UNA3 340 aa17.59■□□□□ 0.41
DDX39A-206ENST00000587730 PRODHO43272 600 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 TLX2O43763 284 aaPredicted RBP17.58■□□□□ 0.41
DDX39A-206ENST00000587730 CDRT1O95170 752 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 PAPLNO95428 1278 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 FGBP02675 491 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 TCEA1P23193 301 aaKnown RBP17.58■□□□□ 0.41
DDX39A-206ENST00000587730 CFL1P23528 166 aaKnown RBP17.58■□□□□ 0.41
DDX39A-206ENST00000587730 FGF9P31371 208 aaPredicted RBP17.58■□□□□ 0.41
DDX39A-206ENST00000587730 NKX2-5P52952 324 aaPredicted RBP17.58■□□□□ 0.41
DDX39A-206ENST00000587730 CDK5Q00535 292 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 REEP5Q00765 189 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 ZNF77Q15935 545 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 TRIM60Q495X7 471 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 LIPKQ5VXJ0 399 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 RAET1GQ6H3X3 334 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 SLC36A4Q6YBV0 504 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 TMEM64Q6YI46 380 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 PLA2G15Q8NCC3 412 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 ZNF740Q8NDX6 193 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 TMIEQ8NEW7 156 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 VN1R2Q8NFZ6 395 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 GRPEL2Q8TAA5 225 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 VANGL1Q8TAA9 524 aaPredicted RBP17.58■□□□□ 0.41
DDX39A-206ENST00000587730 UFD1Q92890 307 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 MOAP1Q96BY2 351 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 ST6GAL2Q96JF0 529 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 SLC35G5Q96KT7 338 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 ZNF582Q96NG8 517 aaPredicted RBP17.58■□□□□ 0.41
DDX39A-206ENST00000587730 DEPDC7Q96QD5 511 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 SLC38A2Q96QD8 506 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 OR52A5Q9H2C5 316 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 SLA2Q9H6Q3 261 aa17.58■□□□□ 0.41
DDX39A-206ENST00000587730 SIRT3Q9NTG7 399 aaPredicted RBP17.58■□□□□ 0.41
DDX39A-206ENST00000587730 FAM227AF5H4B4 570 aa17.58■□□□□ 0.4
DDX39A-206ENST00000587730 KPNA3O00505 521 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms