RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 MMP21Q8N119 569 aa13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 RELL2Q8NC24 303 aaPredicted RBP13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 RHEBL1Q8TAI7 183 aa13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 WDR20Q8TBZ3 569 aa13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 DIO2Q92813 273 aa13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 NSUN5Q96P11 429 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 CENPKQ9BS16 269 aa13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 LYARQ9NX58 379 aaKnown RBP13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 KCNN3Q9UGI6 736 aa13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 ADGRE2Q9UHX3 823 aa13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 PCDHGA11Q9Y5H2 935 aa13.95□□□□□ -0.18
PRKCSH-204ENST00000587290 NF1P21359 2839 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 C15orf38-AP3S2A0A0A6YYH1 394 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 SYCE1LA8MT33 242 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 H0YIV9 168 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 ALDOAP04075 364 aaKnown RBP13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 PTX3P26022 381 aaPredicted RBP13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 ALDH18A1P54886 795 aaKnown RBP13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 DUSP8Q13202 625 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 NTRK2Q16620 822 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 FAM83EQ2M2I3 478 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 TECRLQ5HYJ1 363 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 CES4AQ5XG92 561 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 NUDT13Q86X67 352 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 PTGR2Q8N8N7 351 aaPredicted RBP13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 ZNF441Q8N8Z8 693 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 TNIP2Q8NFZ5 429 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 NEIL3Q8TAT5 605 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 GPATCH1Q9BRR8 931 aaKnown RBP13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 RAB17Q9H0T7 212 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 VPS11Q9H270 941 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 NOL11Q9H8H0 719 aaKnown RBP13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 DDX31Q9H8H2 851 aaKnown RBP13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 DTX4Q9Y2E6 619 aa13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 MAP1AP78559 2803 aaPredicted RBP13.94□□□□□ -0.18
PRKCSH-204ENST00000587290 A0A1B0GTL3 188 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 C2orf92A0A1B0GVN3 265 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 TRIM3O75382 744 aaPredicted RBP13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 KLHL2O95198 593 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 BMP5P22003 454 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 SERPINB3P29508 390 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 CASQ1P31415 396 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 UQCRC1P31930 480 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 IST1P53990 364 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 PHEXP78562 749 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 CAV1Q03135 178 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 NAB1Q13506 487 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 ACAP2Q15057 778 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 PCBP2Q15366 365 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 SGO1Q5FBB7 561 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 DCST1Q5T197 706 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 RIPPLY2Q5TAB7 128 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 FNDC7Q5VTL7 733 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 OR52E8Q6IFG1 317 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 ARSKQ6UWY0 536 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 SYT10Q6XYQ8 523 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 LIX1Q8N485 282 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 SLC15A4Q8N697 577 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 SIMC1Q8NDZ2 872 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 PHF21BQ96EK2 531 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 ZNF597Q96LX8 424 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 RILPQ96NA2 401 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 PELOQ9BRX2 385 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 MRPL1Q9BYD6 325 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 CXorf21Q9HAI6 301 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 DNAJB12Q9NXW2 375 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 CRIM1Q9NZV1 1036 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 CNIH4Q9P003 139 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 SLC6A5Q9Y345 797 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 TSC22D4Q9Y3Q8 395 aa13.93□□□□□ -0.18
PRKCSH-204ENST00000587290 CTAG2O75638 210 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 TRAPPC6AO75865 159 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 ACSL3O95573 720 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 KLK1P06870 262 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 SLC35E2P0CK97 266 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 TYK2P29597 1187 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 CRYZQ08257 329 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 CUL3Q13618 768 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 RPS6KA2Q15349 733 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 ACSF3Q4G176 576 aaPredicted RBP13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 FAM180BQ6P0A1 224 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 GALNT12Q8IXK2 581 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 L3MBTL4Q8NA19 623 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 REPS1Q96D71 796 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 GNRHR2Q96P88 292 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 WDR41Q9HAD4 459 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 ZBTB26Q9HCK0 441 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 ACKR4Q9NPB9 350 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 FARSBQ9NSD9 589 aaKnown RBP13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 ZDHHC18Q9NUE0 388 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 CCM2LQ9NUG4 571 aaPredicted RBP13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 NINJ2Q9NZG7 142 aa13.92□□□□□ -0.18
PRKCSH-204ENST00000587290 MED12LQ86YW9 2145 aa13.91□□□□□ -0.18
PRKCSH-204ENST00000587290 C2orf72A6NCS6 295 aa13.91□□□□□ -0.18
PRKCSH-204ENST00000587290 OR6C76A6NM76 312 aa13.91□□□□□ -0.18
PRKCSH-204ENST00000587290 UGDHO60701 494 aa13.91□□□□□ -0.18
PRKCSH-204ENST00000587290 KRT38O76015 456 aa13.91□□□□□ -0.18
PRKCSH-204ENST00000587290 CLDN9O95484 217 aa13.91□□□□□ -0.18
PRKCSH-204ENST00000587290 GABRA1P14867 456 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms