RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 IGSF5Q9NSI5 407 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 BOKQ9UMX3 212 aaPredicted RBP10.66□□□□□ -0.7
LIG3-207ENST00000586119 RPH3AQ9Y2J0 694 aaPredicted RBP10.66□□□□□ -0.7
LIG3-207ENST00000586119 ASB4Q9Y574 426 aa10.66□□□□□ -0.7
LIG3-207ENST00000586119 ANKHD1Q8IWZ3 2542 aaKnown RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 IQANK1A0A1B0GTG1 560 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 TCRBV9S1A1TA0A576 114 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 C2orf72A6NCS6 295 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 A6NNC1 897 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 HSPB2A8KAH6 182 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 SUPT3HB4E1H0 165 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 TRIM3O75382 744 aaPredicted RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 SUPT3HO75486 399 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 TRAPPC6AO75865 159 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 GPR75O95800 540 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 EPPINO95925 133 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 GBAP04062 536 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 S100BP04271 92 aaPredicted RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 MTHFD2P13995 350 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 COX7A2P14406 83 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 GDF1P27539 372 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 HPDP32754 393 aaPredicted RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 PHBP35232 272 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 SOX18P35713 384 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 PIK3CGP48736 1102 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 NEK2P51955 445 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 RAB10P61026 200 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 PPP2R2AP63151 447 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 TNFRSF17Q02223 184 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 EBPQ15125 230 aaKnown RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 ZKSCAN8Q15776 578 aaPredicted RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 HSPB2Q16082 182 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 ACSF3Q4G176 576 aaPredicted RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 EIPR1Q53HC9 387 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 MRM1Q6IN84 353 aaKnown RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 RNF111Q6ZNA4 994 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 C3orf62Q6ZUJ4 267 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 TRMT10CQ7L0Y3 403 aaKnown RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 LRRC70Q7Z2Q7 622 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 PRR22Q8IZ63 422 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 LIX1Q8N485 282 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 SLC15A4Q8N697 577 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 TEX9Q8N6V9 391 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 ZNF441Q8N8Z8 693 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 DIO2Q92813 273 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 TANKQ92844 425 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 RNASE6Q93091 150 aaKnown RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 RGMAQ96B86 450 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 NXNL1Q96CM4 212 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 TSPAN17Q96FV3 270 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 RMND5BQ96G75 393 aaPredicted RBP10.65□□□□□ -0.7
LIG3-207ENST00000586119 FBXL20Q96IG2 436 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 DOHHQ9BU89 302 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 NSMCE4AQ9NXX6 385 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 SPACA6W5XKT8 324 aa10.65□□□□□ -0.7
LIG3-207ENST00000586119 PCNX3Q9H6A9 2034 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 A0A1W2PPR1 153 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 FAM159BA6NKW6 160 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 AHRRA9YTQ3 701 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 K7EPI3 171 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 SLC35E2BP0CK96 405 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 DNASE1P24855 282 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 TACR1P25103 407 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 SERPINB3P29508 390 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 STX2P32856 288 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 BSGP35613 385 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 GP5P40197 560 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 SLCO1A2P46721 670 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 ASCL1P50553 236 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 RAP1GDS1P52306 607 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 DGKQP52824 942 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 IRF9Q00978 393 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 NAB1Q13506 487 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 NTRK2Q16620 822 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 ERCC6LQ2NKX8 1250 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 FLYWCH1Q4VC44 716 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 WIPI1Q5MNZ9 446 aaPredicted RBP10.64□□□□□ -0.71
LIG3-207ENST00000586119 GRHL2Q6ISB3 625 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 SLC29A4Q7RTT9 530 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 MYLK4Q86YV6 388 aaPredicted RBP10.64□□□□□ -0.71
LIG3-207ENST00000586119 CTAGE3PQ8IX95 158 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 ST13P4Q8IZP2 240 aaPredicted RBP10.64□□□□□ -0.71
LIG3-207ENST00000586119 CNPY4Q8N129 248 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 PPM1NQ8N819 430 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 CHDHQ8NE62 594 aaPredicted RBP10.64□□□□□ -0.71
LIG3-207ENST00000586119 WFDC11Q8NEX6 87 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 GOT1L1Q8NHS2 421 aaPredicted RBP10.64□□□□□ -0.71
LIG3-207ENST00000586119 STAG3L4Q8TBR4 150 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 CDKL2Q92772 493 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 RIT1Q92963 219 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 CPNE1Q99829 537 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 FUT8Q9BYC5 575 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 SLC24A3Q9HC58 644 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 NUDT4Q9NZJ9 180 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 CNIH4Q9P003 139 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 OPTCQ9UBM4 332 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 B4GALT7Q9UBV7 327 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 RAB21Q9UL25 225 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 CAMK2AQ9UQM7 478 aa10.64□□□□□ -0.71
LIG3-207ENST00000586119 FLNAP21333 2647 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms