RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 LIM2P55344 173 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 CLDN6P56747 220 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 SELENOWP63302 87 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 GPLD1P80108 840 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PRR5P85299 388 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 BNIP3Q12983 259 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 SCARB2Q14108 478 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 FAM53BQ14153 422 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 NR1D2Q14995 579 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PRTGQ2VWP7 1150 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 DEFB133Q30KQ1 61 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 INAVAQ3KP66 663 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 FRMPD2BQ6IN97 320 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 REEP3Q6NUK4 255 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 ENPP6Q6UWR7 440 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 USP53Q70EK8 1073 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PIWIL3Q7Z3Z3 882 aaKnown RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 RNF130Q86XS8 419 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PLXDC1Q8IUK5 500 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 SFTPA2Q8IWL1 248 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 OR4N4Q8N0Y3 316 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 C10orf111Q8N326 155 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 GALNT4Q8N4A0 578 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 EID2Q8N6I1 236 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 OR4K14Q8NGD5 310 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PNPT1Q8TCS8 783 aaKnown RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 MIPOL1Q8TD10 442 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 ADAMTS18Q8TE60 1221 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 RASSF5Q8WWW0 418 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 SDCCAG3Q96C92 435 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 NRBF2Q96F24 287 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 AHCYL2Q96HN2 611 aaKnown RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 CNDP2Q96KP4 475 aaKnown RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 ZNF285Q96NJ3 590 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 RDH12Q96NR8 316 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 DOHHQ9BU89 302 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 ANKHQ9HCJ1 492 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PDE7BQ9NP56 450 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 IL1RAPQ9NPH3 570 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 ENAMQ9NRM1 1142 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 SIRT3Q9NTG7 399 aaPredicted RBP9.79□□□□□ -0.84
LIG3-203ENST00000585370 EVA1BQ9NVM1 165 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 GPATCH2Q9NW75 528 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 LRIT1Q9P2V4 623 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 MAP4K5Q9Y4K4 846 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 PCDHGA1Q9Y5H4 931 aa9.79□□□□□ -0.84
LIG3-203ENST00000585370 HELZ2Q9BYK8 2649 aaKnown RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 A0A087WV48 116 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 SLC9B1P1A6NJY1 282 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 C4orf51C9J302 202 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 C5orf58C9J3I9 102 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 P2RX6O15547 441 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 TPST1O60507 370 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ZBTB11O95625 1053 aaPredicted RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 LDOC1O95751 146 aaPredicted RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 ZNF682O95780 498 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 AGR2O95994 175 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 STATHP02808 62 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 FHP07954 510 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ETFAP13804 333 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ITGA2P17301 1181 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 EPHA8P29322 1005 aaPredicted RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 KHKP50053 298 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ARHGDIAP52565 204 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 MAPK10P53779 464 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 VSX2P58304 361 aaPredicted RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 MRPS35P82673 323 aaKnown RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 EEF1A2Q05639 463 aaKnown RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 EPS8Q12929 822 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 HSPB3Q12988 150 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 BIKQ13323 160 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 TP53BP2Q13625 1128 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 RUNX2Q13950 521 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 GK3PQ14409 553 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 DEFB134Q4QY38 66 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 LRRC23Q53EV4 343 aaPredicted RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 CYBRD1Q53TN4 286 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 COX20Q5RI15 118 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 PRAMEF8Q5VWM4 474 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 PRAMEF7Q5VXH5 474 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 C18orf63Q68DL7 685 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 CEACAM20Q6UY09 585 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ZNF761Q86XN6 746 aaPredicted RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 KMT5CQ86Y97 462 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 HIPK1Q86Z02 1210 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ZDHHC13Q8IUH4 622 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ZDHHC21Q8IVQ6 265 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ZC3H7AQ8IWR0 971 aaKnown RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 MARVELD2Q8N4S9 558 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 OR5K1Q8NHB7 308 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 CNRIP1Q96F85 164 aaPredicted RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 VPS50Q96JG6 964 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ZNF681Q96N22 645 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 BBC3Q96PG8 261 aaPredicted RBP9.78□□□□□ -0.84
LIG3-203ENST00000585370 FCRL4Q96PJ5 515 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 ZNF607Q96SK3 696 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 MAP3K3Q99759 626 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 CIB1Q99828 191 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 KLHL25Q9H0H3 589 aa9.78□□□□□ -0.84
LIG3-203ENST00000585370 SYNPO2LQ9H987 977 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms