RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 HSF1Q00613 529 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 SPIN4Q56A73 249 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 SPDYAQ5MJ70 313 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 EMBQ6PCB8 327 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 FRMD7Q6ZUT3 714 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 SPPL2CQ8IUH8 684 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 SLC15A4Q8N697 577 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 GOLM1Q8NBJ4 401 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 OR2M7Q8NG81 312 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 C16orf52Q8NHV5 167 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 AENQ8WTP8 325 aaKnown RBP18.88■□□□□ 0.61
SS18-224ENST00000584083 KLHL29Q96CT2 875 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 WWTR1Q9GZV5 400 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 OXSMQ9NWU1 459 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 MCM8Q9UJA3 840 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 CES1P1Q9UKY3 287 aa18.88■□□□□ 0.61
SS18-224ENST00000584083 H3BQF6 201 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 CDC40O60508 579 aaKnown RBP eCLIP18.87■□□□□ 0.61
SS18-224ENST00000584083 P04436 131 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 CT62P0C5K7 136 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 CSNK2A2P19784 350 aaPredicted RBP18.87■□□□□ 0.61
SS18-224ENST00000584083 CNR1P21554 472 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 PTGER1P34995 402 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 FOXA1P55317 472 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 EBPQ15125 230 aaKnown RBP18.87■□□□□ 0.61
SS18-224ENST00000584083 C3AR1Q16581 482 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 IMPG1Q17R60 797 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 LIPMQ5VYY2 423 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 HLA-DQA1Q5Y7H0 255 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 WDR93Q6P2C0 686 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 APIPQ96GX9 242 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 FAM173AQ9BQD7 235 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 SHCBP1LQ9BZQ2 653 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 SACM1LQ9NTJ5 587 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 TINAGQ9UJW2 476 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 DLGAP4Q9Y2H0 992 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 ZNF835Q9Y2P0 537 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 ZNF780BQ9Y6R6 833 aa18.87■□□□□ 0.61
SS18-224ENST00000584083 A0A0G2JMM0 328 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 C2orf92A0A1B0GVN3 265 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 A0A1W2PPB8 328 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 A0A1W2PRS3 328 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 PINLYPA6NC86 204 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 KIR3DP1A8MWS1 328 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 ACOT7O00154 380 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 ZNHIT1O43257 154 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 NADKO95544 446 aaPredicted RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 CLPSP04118 112 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 CCL3P10147 92 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 ESRRAP11474 423 aaPredicted RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 PPIAP62937 165 aaKnown RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 RAE1P78406 368 aaKnown RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 FUT7Q11130 342 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 ZNF791Q3KP31 576 aaPredicted RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 SLC22A10Q63ZE4 541 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 MTFR2Q6P444 385 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 BNC2Q6ZN30 1099 aaPredicted RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 GK5Q6ZS86 529 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 FAM47EQ6ZV65 393 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 C10orf107Q8IVU9 208 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 SRRM1Q8IYB3 904 aaKnown RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 FAM13CQ8NE31 585 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 CAVIN3Q969G5 261 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 SPACA9Q96E40 222 aaPredicted RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 APOPT1Q96IL0 206 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 ROPN1BQ9BZX4 212 aaPredicted RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 BRINP2Q9C0B6 783 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 OR10A5Q9H207 317 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 ROPN1Q9HAT0 212 aaPredicted RBP18.86■□□□□ 0.61
SS18-224ENST00000584083 PFDN4Q9NQP4 134 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 NINQ8N4C6 2090 aa18.86■□□□□ 0.61
SS18-224ENST00000584083 FAM166BA8MTA8 275 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 PDE9AO76083 593 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 IL3P08700 152 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 SERPINB3P29508 390 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 TIA1P31483 386 aaKnown RBP eCLIP18.85■□□□□ 0.61
SS18-224ENST00000584083 NR0B1P51843 470 aaKnown RBP18.85■□□□□ 0.61
SS18-224ENST00000584083 FAM180BQ6P0A1 224 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 Q6ZPB1 254 aaPredicted RBP18.85■□□□□ 0.61
SS18-224ENST00000584083 TRABD2AQ86V40 505 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 TAGAPQ8N103 731 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 VWA5B2Q8N398 1253 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 OR7G1Q8NGA0 311 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 C16orf78Q8WTQ4 265 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 EBPLQ9BY08 206 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 DEFB127Q9H1M4 99 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 HEY2Q9UBP5 337 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 BCAP29Q9UHQ4 241 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 LGALS13Q9UHV8 139 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 UTS2RQ9UKP6 389 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 PLLPQ9Y342 182 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 PCNX1Q96RV3 2341 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 ZNF407Q9C0G0 2248 aa18.85■□□□□ 0.61
SS18-224ENST00000584083 SERTM1A2A2V5 107 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 ESPNB1AK53 854 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 ATP1B1P05026 303 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 ANXA4P09525 319 aaPredicted RBP18.84■□□□□ 0.61
SS18-224ENST00000584083 FBXO45P0C2W1 286 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 DRD2P14416 443 aa18.84■□□□□ 0.61
SS18-224ENST00000584083 COL8A1P27658 744 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms