RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 MED25Q71SY5 747 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 COMMD6Q7Z4G1 85 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 HPS6Q86YV9 775 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 CA13Q8N1Q1 262 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 GOLM1Q8NBJ4 401 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 VPS37AQ8NEZ2 397 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 SLC26A7Q8TE54 656 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 TESCQ96BS2 214 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 LRRC58Q96CX6 371 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 ITCHQ96J02 903 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 FCRL1Q96LA6 429 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 SOX17Q9H6I2 414 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 TMEM181Q9P2C4 612 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 ABCD2Q9UBJ2 740 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 C3orf18Q9UK00 162 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 DAPP1Q9UN19 280 aa12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 WBP11Q9Y2W2 641 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 MRPS18BQ9Y676 258 aaKnown RBP12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 USP9YO00507 2555 aaPredicted RBP12.67□□□□□ -0.38
CSNK1D-220ENST00000581737 A0A0A6YYD5 115 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 IDSB3KWA1 339 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 H0Y3Z8 333 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 CLDN4O14493 209 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 CNOT3O75175 753 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 ERN1O75460 977 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 BCAS2O75934 225 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 HEXBP07686 556 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 HSD17B1P14061 328 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 TLX1P31314 330 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 BUD31P41223 144 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 SLC7A2P52569 658 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 EMP2P54851 167 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 LIM2P55344 173 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 C21orf58P58505 322 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 CDC20Q12834 499 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 SLAMF1Q13291 335 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 RUNX2Q13950 521 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 TRIM25Q14258 630 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 CCNYL2Q5T2Q4 361 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 NOXRED1Q6NXP6 359 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 BORAQ6PGQ7 559 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 R3HCC1LQ7Z5L2 792 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 ZNF595Q8IYB9 648 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 PRSS58Q8IYP2 241 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 TMEM132CQ8N3T6 1108 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 C1orf52Q8N6N3 182 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 EFCAB3Q8N7B9 438 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 CATSPER1Q8NEC5 780 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 C7orf57Q8NEG2 295 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 OR8J3Q8NGG0 315 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 WDR60Q8WVS4 1066 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 METTL21AQ8WXB1 218 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 THAP4Q8WY91 577 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 SORBS1Q9BX66 1292 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 ZNF717Q9BY31 904 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 ZNF71Q9NQZ8 489 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 ATAD3AQ9NVI7 634 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 FAM120CQ9NX05 1096 aaKnown RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 SIRT5Q9NXA8 310 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 C19orf25Q9UFG5 118 aaPredicted RBP12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 MKL2Q9ULH7 1088 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 MMACHCQ9Y4U1 282 aa12.66□□□□□ -0.38
CSNK1D-220ENST00000581737 CSMD1Q96PZ7 3565 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 CDC14CA4D256 554 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 PEX12O00623 359 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 PCDH7O60245 1069 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 PGRP06401 933 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 KLK1P06870 262 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 UMODP07911 640 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 FAM58BPP0C7Q3 252 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 HOXB6P17509 224 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 CPN2P22792 545 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 MMP11P24347 488 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 PPP2R1BP30154 601 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 TIA1P31483 386 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■□□□□ 9.2
CSNK1D-220ENST00000581737 OTX2P32243 289 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 VHLP40337 213 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 CASRP41180 1078 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 MAPK12P53778 367 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 TRA2BP62995 288 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 TNFRSF17Q02223 184 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 IL10RAQ13651 578 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 C4orf17Q53FE4 359 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 C6orf10Q5SRN2 563 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 ANXA8L1Q5VT79 327 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 MRM1Q6IN84 353 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 C8orf82Q6P1X6 216 aaPredicted RBP12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 GALNT18Q6P9A2 607 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 QSOX2Q6ZRP7 698 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 SHISA6Q6ZSJ9 500 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 GPR180Q86V85 440 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 NATD1Q8N6N6 113 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 CHTF18Q8WVB6 975 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 GPATCH1Q9BRR8 931 aaKnown RBP12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 RBCK1Q9BYM8 510 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 VN1R1Q9GZP7 353 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 ADNPQ9H2P0 1102 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 S100A14Q9HCY8 104 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 LANCL2Q9NS86 450 aa12.65□□□□□ -0.38
CSNK1D-220ENST00000581737 MCM8Q9UJA3 840 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms