RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 VSIG4Q9Y279 399 aa3.46□□□□□ -1.86
SMCHD1-204ENST00000581226 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 SLC28A1O00337 649 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 SFTPBP07988 381 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 MMP10P09238 476 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 HMGCLP35914 325 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 CASP3P42574 277 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 NAAAQ02083 359 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 MSLNQ13421 630 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 TIMM50Q3ZCQ8 353 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 C14orf28Q4W4Y0 310 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 EPC2Q52LR7 807 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 LINC00242Q5T6M2 205 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 CDC42EP5Q6NZY7 148 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 B3GLCTQ6Y288 498 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 ZNF600Q6ZNG1 722 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 SH2D6Q7Z4S9 175 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 SERPINA12Q8IW75 414 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 UNC45BQ8IWX7 931 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 SLC22A18ASQ8N1D0 253 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 CD177Q8N6Q3 437 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 TBCKQ8TEA7 893 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 ZBED6CLQ96FA7 236 aaPredicted RBP3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 CAPNS2Q96L46 248 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 FAM213AQ9BRX8 229 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 ZBP1Q9H171 429 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 DCTPP1Q9H773 170 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 VPS54Q9P1Q0 977 aa3.45□□□□□ -1.86
SMCHD1-204ENST00000581226 CCER2I3L3R5 266 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 ATP6V1G1O75348 118 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 RHBDL1O75783 438 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 REC8O95072 547 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 HMOX1P09601 288 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 UGT1A6P19224 532 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 ACADSBP45954 432 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 NSFP46459 744 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 SLC7A2P52569 658 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 RPS4XP62701 263 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 EXOSC7Q15024 291 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 RHBDD2Q6NTF9 364 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 TOM1L2Q6ZVM7 507 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 GPR142Q7Z601 462 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 FAM9BQ8IZU0 186 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 SFRP1Q8N474 314 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 ARL14Q8N4G2 192 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 KLHL30-AS1Q8NEE0 82 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 RAB3CQ96E17 227 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 AMBNQ9NP70 447 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 AKAP7Q9P0M2 348 aaPredicted RBP3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 MRPS2Q9Y399 296 aaKnown RBP3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 AFF2P51816 1311 aa3.44□□□□□ -1.86
SMCHD1-204ENST00000581226 IGKV6D-41A0A0C4DH26 115 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 A0A0U1RQG5 324 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 A0A1W2PQ72 361 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 ZSCAN5CA6NGD5 496 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 EEF2KO00418 725 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 CHEK1O14757 476 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 GOSR1O95249 250 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 SERPINF2P08697 491 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 UMPSP11172 480 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 P4HA1P13674 534 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 FCARP24071 287 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 MFAP2P55001 183 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 PPIAP62937 165 aaKnown RBP3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 KLF5Q13887 457 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 LTB4RQ15722 352 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 HAGHQ16775 308 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 GPAT3Q53EU6 434 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 TCHHL1Q5QJ38 904 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 MARC1Q5VT66 337 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 FAM219BQ5XKK7 198 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 APOOLQ6UXV4 268 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 MOB2Q70IA6 237 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 ASRGL1Q7L266 308 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 NAXDQ8IW45 347 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 RDH11Q8TC12 318 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 SNX21Q969T3 373 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 RAB39BQ96DA2 213 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 SERAC1Q96JX3 654 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 GPR137Q96N19 417 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 RANBP9Q96S59 729 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 JPH2Q9BR39 696 aaPredicted RBP3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 TTYH2Q9BSA4 534 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 ST6GALNAC5Q9BVH7 336 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 ABCG4Q9H172 646 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 ADGRL4Q9HBW9 690 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 COMMD8Q9NX08 183 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 ERVK-18Q9QC07 812 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 TUBGCP4Q9UGJ1 667 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 MLXQ9UH92 298 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 CIDEBQ9UHD4 219 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 ATG4BQ9Y4P1 393 aa3.43□□□□□ -1.86
SMCHD1-204ENST00000581226 SH2D1BO14796 132 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 KINO60870 393 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 NUDT14O95848 222 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 GOT2P00505 430 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 AREGP15514 252 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 TRIM23P36406 574 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms