RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 ZNF446Q9NWS9 450 aa12.92□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ASIC5Q9NY37 505 aa12.92□□□□□ -0.34
SNORD3B-1-201ENST00000577988 MYOTQ9UBF9 498 aa12.92□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ZNF223Q9UK11 482 aaPredicted RBP12.92□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ATP6AP2A0A1C7CYW4 349 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 GABRR3A8MPY1 467 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 MYO1GB0I1T2 1018 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ATP6AP2O75787 350 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 IFI6P09912 130 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 SDC1P18827 310 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 TNFSF10P50591 281 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 HLCSP50747 726 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ERVK-8P63133 956 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ZNF169Q14929 603 aaPredicted RBP12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 PDCD2Q16342 344 aaPredicted RBP12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 MPEG1Q2M385 716 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 PRICKLE4Q2TBC4 344 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 PLEKHN1Q494U1 663 aaPredicted RBP12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 NADK2Q4G0N4 442 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 HSP90B2PQ58FF3 399 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 FCRLBQ6BAA4 426 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 DGAT2L6Q6ZPD8 337 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 SLC29A4Q7RTT9 530 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ZNF605Q86T29 641 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 TICAM1Q8IUC6 712 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 MMP21Q8N119 569 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 BEST3Q8N1M1 668 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 SLC15A4Q8N697 577 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ARFGAP2Q8N6H7 521 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 FNDC5Q8NAU1 212 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 PIWIL2Q8TC59 973 aaKnown RBP12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 DYDC1Q8WWB3 177 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 TP53INP1Q96A56 240 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 CTHRC1Q96CG8 243 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 EGLN2Q96KS0 407 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 C7orf26Q96N11 449 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 BBS4Q96RK4 519 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 NPAS2Q99743 824 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 MED4Q9NPJ6 270 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 PNPOQ9NVS9 261 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 NOP53Q9NZM5 478 aaKnown RBP12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ERVK-19Q9WJR5 959 aa12.91□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ITGA10O75578 1167 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 SORBS2O94875 1100 aaKnown RBP12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 LBPP18428 481 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 TACR1P25103 407 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 NTSP30990 170 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 CD96P40200 585 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 CD97P48960 835 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 CYB561P49447 251 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 SSR4P51571 173 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 SLC37A1P57057 533 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 TUBA3CQ13748 450 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 PDE7AQ13946 482 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 INAQ16352 499 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 IL23RQ5VWK5 629 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 OGFOD2Q6N063 350 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 TUBA3EQ6PEY2 450 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 OPN5Q6U736 354 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 CCDC116Q8IYX3 515 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 DND1Q8IYX4 353 aaKnown RBP12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 VWA5B2Q8N398 1253 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 AMER2Q8N7J2 671 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 C17orf47Q8NEP4 570 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 CDC26Q8NHZ8 85 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 EXOSC8Q96B26 276 aaKnown RBP12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 TSSK3Q96PN8 268 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 PRPF18Q99633 342 aaKnown RBP12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 MFRPQ9BY79 579 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 NUF2Q9BZD4 464 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.9□□□□□ -0.344e-6■■■■□ 20.4
SNORD3B-1-201ENST00000577988 OR10A5Q9H207 317 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 AKTIPQ9H8T0 292 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 PLA2G3Q9NZ20 509 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 MAT2BQ9NZL9 334 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ATP6V1HQ9UI12 483 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 ZNF639Q9UID6 485 aa12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 EXO1Q9UQ84 846 aaKnown RBP12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 NUP214P35658 2090 aaPredicted RBP12.9□□□□□ -0.34
SNORD3B-1-201ENST00000577988 A0A1W2PS29 197 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 TMEM200CA6NKL6 621 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 PLOD3O60568 738 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 PRAMEF2O60811 474 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 CD46P15529 392 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 PRPS1L1P21108 318 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 S1PR1P21453 382 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 HPCAL1P37235 193 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 CLDN8P56748 225 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 C21orf58P58505 322 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 OC90Q02509 493 aaPredicted RBP12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 MGAT2Q10469 447 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 ZNF750Q32MQ0 723 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 PIGGQ5H8A4 983 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 HLA-DQA1Q5Y7H0 255 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 LARP4Q71RC2 724 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 SPATA19Q7Z5L4 167 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 WDR75Q8IWA0 830 aaKnown RBP12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 LIX1Q8N485 282 aa12.89□□□□□ -0.35
SNORD3B-1-201ENST00000577988 TMEM156Q8N614 296 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms