RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 FPR1P21462 350 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 PTPN6P29350 595 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 CPOXP36551 454 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 HSPA7P48741 367 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 STARP49675 285 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 NR1H2P55055 460 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 TAS2R39P59534 338 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 DESI1Q6ICB0 168 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 HMBOX1Q6NT76 420 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 CCDC137Q6PK04 289 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 FRA10AC1Q70Z53 315 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 GALNT7Q86SF2 657 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 PHC2Q8IXK0 858 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 PPIL6Q8IXY8 311 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 PRR22Q8IZ63 422 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 GCNT2Q8N0V5 402 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 TAGAPQ8N103 731 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 RNF175Q8N4F7 328 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 SNX31Q8N9S9 440 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 SRFBP1Q8NEF9 429 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 FAM83FQ8NEG4 500 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 ZNF473Q8WTR7 871 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 ANKRD7Q92527 254 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 RIT1Q92963 219 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 PTCD3Q96EY7 689 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 ART5Q96L15 291 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 HS3ST6Q96QI5 342 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 KRT12Q99456 494 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 PIGQQ9BRB3 760 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 SFXN3Q9BWM7 321 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 MS4A8Q9BY19 250 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 ROGDIQ9GZN7 287 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 PITHD1Q9GZP4 211 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 EHD1Q9H4M9 534 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 LZTFL1Q9NQ48 299 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 DNAJC11Q9NVH1 559 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 GPRC5BQ9NZH0 403 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 TESMINQ9Y4I5 508 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 HEATR5AQ86XA9 2040 aa9.21□□□□□ -0.94
NPLOC4-220ENST00000576940 MED12LQ86YW9 2145 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 NBEAL1Q6ZS30 2694 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 MXRA5Q9NR99 2828 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 SONP18583 2426 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 GLOD5A6NK44 160 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 PCNAP12004 261 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 CPN1P15169 458 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 EPORP19235 508 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 SSTR4P31391 388 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 MC3RP41968 323 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 SSR2P43308 183 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 PTH2RP49190 550 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 PLIN5Q00G26 463 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 PCDH1Q08174 1060 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 CHIT1Q13231 466 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 BIKQ13323 160 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 RPS6KA2Q15349 733 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 TGFBIQ15582 683 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 HIST2H2ACQ16777 129 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 RNASEH2BQ5TBB1 312 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 TIGD3Q6B0B8 471 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 HIST2H2AA3Q6FI13 130 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 OR4C11Q6IEV9 310 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 C22orf34Q6ZV56 151 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 ST13P4Q8IZP2 240 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 ZNF441Q8N8Z8 693 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 SPC24Q8NBT2 197 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 MAPK1IP1LQ8NDC0 245 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 C7orf57Q8NEG2 295 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 OR1J4Q8NGS1 313 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 RDH11Q8TC12 318 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 TANKQ92844 425 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 WDR34Q96EX3 536 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 CFAP36Q96G28 342 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 G6PC3Q9BUM1 346 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 PHACTR1Q9C0D0 580 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 OR51B5Q9H339 312 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 WWOXQ9NZC7 414 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 PSAT1Q9Y617 370 aa9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 CHD3Q12873 2000 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-220ENST00000576940 USF3Q68DE3 2245 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 FAM95CA0A1B0GW59 222 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 A0A1W2PS29 197 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 CAPN14A8MX76 684 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 GOLGA6L6A8MZA4 724 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 H0Y3Z8 333 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 OR10H2O60403 315 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 STK16O75716 305 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 TNFSF13O75888 250 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 SCELO95171 688 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 GPR75O95800 540 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 TGM6O95932 706 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ACTL6AO96019 429 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 GGT5P36269 586 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 ELK3P41970 407 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 DIO3P55073 304 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 HNRNPH2P55795 449 aaKnown RBP9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 IRF8Q02556 426 aa9.19□□□□□ -0.94
NPLOC4-220ENST00000576940 KRTAP1-1Q07627 177 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms