RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 RPS4XP62701 263 aaKnown RBP3.81□□□□□ -1.8
CDC27-219ENST00000576484 ANKRD55Q3KP44 614 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 GPAT3Q53EU6 434 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 DDI2Q5TDH0 399 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 RNLSQ5VYX0 342 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 LIPJQ5W064 366 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 RHBDD2Q6NTF9 364 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 Q6ZR54 194 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 GPR142Q7Z601 462 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 SLC22A16Q86VW1 577 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 FAM9BQ8IZU0 186 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 RDH11Q8TC12 318 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 AGAP11Q8TF27 550 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 SLCO4A1Q96BD0 722 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 CARD9Q9H257 536 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 SLC7A10Q9NS82 523 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 COMMD8Q9NX08 183 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 RCOR3Q9P2K3 495 aaPredicted RBP3.81□□□□□ -1.8
CDC27-219ENST00000576484 MRPS2Q9Y399 296 aaKnown RBP3.81□□□□□ -1.8
CDC27-219ENST00000576484 ATG4BQ9Y4P1 393 aa3.81□□□□□ -1.8
CDC27-219ENST00000576484 CCDC69A6NI79 296 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 ZNF487B1APH4 448 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 EEF2KO00418 725 aaKnown RBP3.8□□□□□ -1.8
CDC27-219ENST00000576484 LRRTM2O43300 516 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 KBTBD11O94819 623 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 CALML3P27482 149 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 TNFRSF4P43489 277 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 CNN1P51911 297 aaKnown RBP3.8□□□□□ -1.8
CDC27-219ENST00000576484 GSTO1P78417 241 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 ARF5P84085 180 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 GFPT1Q06210 699 aaPredicted RBP3.8□□□□□ -1.8
CDC27-219ENST00000576484 LINC00518Q8N0U6 118 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 MSANTD4Q8NCY6 345 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 BEST4Q8NFU0 473 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 CCDC43Q96MW1 224 aaKnown RBP3.8□□□□□ -1.8
CDC27-219ENST00000576484 SPATA13Q96N96 652 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 TTYH2Q9BSA4 534 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 ACAT2Q9BWD1 397 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 ABCG4Q9H172 646 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 ZNF107Q9UII5 783 aaPredicted RBP3.8□□□□□ -1.8
CDC27-219ENST00000576484 TRMT6Q9UJA5 497 aaKnown RBP3.8□□□□□ -1.8
CDC27-219ENST00000576484 SLC6A5Q9Y345 797 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 GON4LQ3T8J9 2241 aa3.8□□□□□ -1.8
CDC27-219ENST00000576484 TRAV9-2A0A087WT02 112 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 A0A0U1RQG5 324 aaPredicted RBP3.79□□□□□ -1.8
CDC27-219ENST00000576484 A0A1W2PQ72 361 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 DDX39AO00148 427 aaKnown RBP3.79□□□□□ -1.8
CDC27-219ENST00000576484 KERAO60938 352 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 LRP3O75074 770 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 UCP1P25874 307 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 ACADSBP45954 432 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 NDST1P52848 882 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 KRTAP10-3P60369 221 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 CDKL1Q00532 357 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 UBXN1Q04323 297 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 ABRAXAS2Q15018 415 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 C14orf28Q4W4Y0 310 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 ABRAXAS1Q6UWZ7 409 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 RAPH1Q70E73 1250 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 MOB2Q70IA6 237 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 ASRGL1Q7L266 308 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 P3H4Q92791 437 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 ZNF560Q96MR9 790 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 MCCC1Q96RQ3 725 aaPredicted RBP3.79□□□□□ -1.8
CDC27-219ENST00000576484 RANBP9Q96S59 729 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 ZBP1Q9H171 429 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 TRPV6Q9H1D0 765 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 ADGRL4Q9HBW9 690 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 SEC14L4Q9UDX3 406 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 MLXQ9UH92 298 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 APPL1Q9UKG1 709 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 IKZF3Q9UKT9 509 aa3.79□□□□□ -1.8
CDC27-219ENST00000576484 TDRKHQ9Y2W6 561 aaKnown RBP3.79□□□□□ -1.8
CDC27-219ENST00000576484 NPC1L1Q9UHC9 1359 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 AFF2P51816 1311 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 FAM205AQ6ZU69 1335 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 MACROD2A1Z1Q3 448 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 PHOX2AO14813 284 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 OAS1P00973 400 aaKnown RBP3.78□□□□□ -1.8
CDC27-219ENST00000576484 P4HA1P13674 534 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 HSD17B1P14061 328 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 PPP2R1BP30154 601 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 COPB2P35606 906 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 HMGCLP35914 325 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 NLRP11P59045 1033 aaKnown RBP3.78□□□□□ -1.8
CDC27-219ENST00000576484 TSTA3Q13630 321 aaPredicted RBP3.78□□□□□ -1.8
CDC27-219ENST00000576484 CRMP1Q14194 572 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 HAGHQ16775 308 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 SLC22A6Q4U2R8 563 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 TCHHL1Q5QJ38 904 aaPredicted RBP3.78□□□□□ -1.8
CDC27-219ENST00000576484 ACER2Q5QJU3 275 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 FAM219BQ5XKK7 198 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 DLEU7Q6UYE1 221 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 SERINC5Q86VE9 423 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 RHOXF1Q8NHV9 184 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 BIRC7Q96CA5 298 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 EEF2KMTQ96G04 330 aa3.78□□□□□ -1.8
CDC27-219ENST00000576484 RBM18Q96H35 190 aaKnown RBP3.78□□□□□ -1.8
CDC27-219ENST00000576484 ACCSQ96QU6 501 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms