RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ARL2BPQ9Y2Y0 163 aa15.95■□□□□ 0.14
NUP88-210ENST00000574867 RNASET2O00584 256 aaKnown RBP15.94■□□□□ 0.14
NUP88-210ENST00000574867 SLC22A2O15244 555 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 PGRP06401 933 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 ADSLP30566 484 aaPredicted RBP15.94■□□□□ 0.14
NUP88-210ENST00000574867 PGDP52209 483 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 MANFP55145 182 aaKnown RBP15.94■□□□□ 0.14
NUP88-210ENST00000574867 MAP4K2Q12851 820 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 BTBD16Q32M84 506 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 ZNF628Q5EBL2 1059 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 OR4F3Q6IEY1 312 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 DGAT2L6Q6ZPD8 337 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 MSANTD1Q6ZTZ1 278 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 VWA5B2Q8N398 1253 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 NFAM1Q8NET5 270 aaPredicted RBP15.94■□□□□ 0.14
NUP88-210ENST00000574867 OR9A2Q8NGT5 310 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 M1APQ8TC57 530 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 SLC2A12Q8TD20 617 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 NEUROD4Q9HD90 331 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 ATP13A2Q9NQ11 1180 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 SAR1AQ9NR31 198 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.94■□□□□ 0.14
NUP88-210ENST00000574867 MAT2BQ9NZL9 334 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 DMXL2Q8TDJ6 3036 aa15.94■□□□□ 0.14
NUP88-210ENST00000574867 A0A1W2PRB8 838 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 DYTNA2CJ06 578 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 ARGFXA6NJG6 315 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 ZFP36L2P47974 494 aaKnown RBP15.93■□□□□ 0.14
NUP88-210ENST00000574867 KCNK10P57789 538 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 CXADRP78310 365 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 DEFB109BQ30KR1 87 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 NUDT8Q8WV74 236 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 OR5P2Q8WZ92 322 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 VMP1Q96GC9 406 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 CNTNAP3BQ96NU0 1288 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 CNPPD1Q9BV87 410 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 CNTNAP3Q9BZ76 1288 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 OR8D2Q9GZM6 311 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 MMP25Q9NPA2 562 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 CCDC167Q9P0B6 97 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 PRSS51A0A1B0GVH4 220 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 C9JVG2 144 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 DDAH2O95865 285 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 HSPB3Q12988 150 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 LTB4RQ15722 352 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 AGKQ53H12 422 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 BLOC1S3Q6QNY0 202 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 APLFQ8IW19 511 aaPredicted RBP15.93■□□□□ 0.14
NUP88-210ENST00000574867 KBTBD2Q8IY47 623 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 OR1N1Q8NGS0 311 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 CTHRC1Q96CG8 243 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 SENP5Q96HI0 755 aaPredicted RBP15.93■□□□□ 0.14
NUP88-210ENST00000574867 SEMA4CQ9C0C4 833 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 NMUR2Q9GZQ4 415 aa15.93■□□□□ 0.14
NUP88-210ENST00000574867 PTPRQQ9UMZ3 2332 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 IGKV3-11P04433 115 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 SERPINA7P05543 415 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 GPC1P35052 558 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 GPR143P51810 404 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 WNT3P56703 355 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 FUT7Q11130 342 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 ZNF267Q14586 743 aaPredicted RBP15.92■□□□□ 0.14
NUP88-210ENST00000574867 ZNF551Q7Z340 670 aaPredicted RBP15.92■□□□□ 0.14
NUP88-210ENST00000574867 ANKS4BQ8N8V4 417 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 APCDD1LQ8NCL9 501 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 ADCY4Q8NFM4 1077 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 OR7G1Q8NGA0 311 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 ZNF721Q8TF20 911 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 NCLNQ969V3 563 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 OR52E6Q96RD3 313 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 ING2Q9H160 280 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 PTGFRNQ9P2B2 879 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 ERVK-19Q9WJR5 959 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 KCNMB2Q9Y691 235 aa15.92■□□□□ 0.14
NUP88-210ENST00000574867 A0A087WV62 115 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 PLOD2O00469 737 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 FCHO1O14526 889 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 CFLARO15519 480 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 PLOD3O60568 738 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 SCN2BO60939 215 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 BCAS2O75934 225 aaPredicted RBP15.91■□□□□ 0.14
NUP88-210ENST00000574867 CT62P0C5K7 136 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 DGKQP52824 942 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 MGAT2Q10469 447 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 TIGD2Q4W5G0 525 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 JMJD6Q6NYC1 403 aaPredicted RBP15.91■□□□□ 0.14
NUP88-210ENST00000574867 FUNDC1Q8IVP5 155 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 PSMA8Q8TAA3 256 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 TSPEARQ8WU66 669 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 RMND5AQ9H871 391 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 ZNF639Q9UID6 485 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 BTNL2Q9UIR0 455 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 PCDHGB4Q9UN71 923 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 CAPN7Q9Y6W3 813 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 TPRP12270 2363 aaKnown RBP15.91■□□□□ 0.14
NUP88-210ENST00000574867 CCDC154A6NI56 674 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 NR5A2O00482 541 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 NDUFAB1O14561 156 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 DCTN3O75935 186 aa15.91■□□□□ 0.14
NUP88-210ENST00000574867 CLCN2P51788 898 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms