RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 AGRPO00253 132 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 GUCY1B2O75343 617 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 TBX6O95947 436 aaPredicted RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 SOD1P00441 154 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 ALDH6A1Q02252 535 aaKnown RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 MADCAM1Q13477 382 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 NFE2L1Q14494 772 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 SYPL1Q16563 259 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 UAP1L1Q3KQV9 507 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 FLYWCH1Q4VC44 716 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 PYDC2Q56P42 97 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 DDI2Q5TDH0 399 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 KHDRBS2Q5VWX1 349 aaKnown RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 ACSM5Q6NUN0 579 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 PARS2Q7L3T8 475 aaKnown RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 ZER1Q7Z7L7 766 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 UBE2J2Q8N2K1 259 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 DTD2Q96FN9 168 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 PPP1R16AQ96I34 528 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 KCTD7Q96MP8 289 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 FNDC11Q9BVV2 318 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 ZNF717Q9BY31 904 aaPredicted RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 MCOLN1Q9GZU1 580 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 RANGRFQ9HD47 186 aaPredicted RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 HCFC1R1Q9NWW0 138 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 NUFIP1Q9UHK0 495 aaKnown RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 ASF1AQ9Y294 204 aa14.81□□□□□ -0.04
NUP88-207ENST00000573584 YARS2Q9Y2Z4 477 aaKnown RBP14.81□□□□□ -0.04
NUP88-207ENST00000573584 KPNA3O00505 521 aaPredicted RBP14.8□□□□□ -0.04
NUP88-207ENST00000573584 CCL16O15467 120 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 SCO2O43819 266 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 POP7O75817 140 aaKnown RBP14.8□□□□□ -0.04
NUP88-207ENST00000573584 CSF2P04141 144 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 DDX5P17844 614 aaKnown RBP14.8□□□□□ -0.04
NUP88-207ENST00000573584 MYL12AP19105 171 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 MMP11P24347 488 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 SLC9A3P48764 834 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 CCT3P49368 545 aaKnown RBP14.8□□□□□ -0.04
NUP88-207ENST00000573584 BNC1Q01954 994 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 COX10Q12887 443 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 SLC35F1Q5T1Q4 408 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 HSDL2Q6YN16 418 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 SZRD1Q7Z422 152 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 CAMKK1Q8N5S9 505 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 SLC7A6Q92536 515 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 ZNF582Q96NG8 517 aaPredicted RBP14.8□□□□□ -0.04
NUP88-207ENST00000573584 PLSCR3Q9NRY6 295 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 SIRT3Q9NTG7 399 aaPredicted RBP14.8□□□□□ -0.04
NUP88-207ENST00000573584 A0A1W2PRQ8 180 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 B4DXG7 233 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 LILRB3O75022 631 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 APOL3O95236 402 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 OR12D1P0DN82 309 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 MYL9P24844 172 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 LSM11P83369 360 aaKnown RBP eCLIP14.8□□□□□ -0.04
NUP88-207ENST00000573584 OR2G6Q5TZ20 316 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 ZNF547Q8IVP9 402 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 VWA5B2Q8N398 1253 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 NATD1Q8N6N6 113 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 OR4K5Q8NGD3 323 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 XAGE5Q8WWM1 108 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 FYTTD1Q96QD9 318 aaKnown RBP14.8□□□□□ -0.04
NUP88-207ENST00000573584 ZDHHC5Q9C0B5 715 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 TMEM245Q9H330 911 aa14.8□□□□□ -0.04
NUP88-207ENST00000573584 CACNB4O00305 520 aaPredicted RBP14.79□□□□□ -0.04
NUP88-207ENST00000573584 NR2F6P10588 404 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 LAG3P18627 525 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 ACADLP28330 430 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 SSTR4P31391 388 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 BSGP35613 385 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 PCBP4P57723 403 aaKnown RBP14.79□□□□□ -0.04
NUP88-207ENST00000573584 SNAPC1Q16533 368 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 GPAT3Q53EU6 434 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 SLC25A30Q5SVS4 291 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 RAET1GQ6H3X3 334 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 COMTD1Q86VU5 262 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 RDH10Q8IZV5 341 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 TBC1D19Q8N5T2 526 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 TCEAL4Q96EI5 215 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 COQ10AQ96MF6 247 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 FRMD6Q96NE9 622 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 PRAMEF27A3QJZ7 478 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 LRRTM2O43300 516 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 EPHX1P07099 455 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 GPR1P46091 355 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 WNT4P56705 351 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 RPS25P62851 125 aaKnown RBP14.79□□□□□ -0.04
NUP88-207ENST00000573584 PLK5Q496M5 336 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 CRTC2Q53ET0 693 aaPredicted RBP14.79□□□□□ -0.04
NUP88-207ENST00000573584 KLHL22Q53GT1 634 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 LCTLQ6UWM7 567 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 NOXA1Q86UR1 476 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 IQCHQ86VS3 1027 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 ZNF557Q8N988 423 aaPredicted RBP14.79□□□□□ -0.04
NUP88-207ENST00000573584 ANKRD53Q8N9V6 530 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 SIMC1Q8NDZ2 872 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 OR5D16Q8NGK9 328 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 OR5AR1Q8NGP9 310 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 UBASH3BQ8TF42 649 aa14.79□□□□□ -0.04
NUP88-207ENST00000573584 GATAD2BQ8WXI9 593 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms