RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 LIN28AQ9H9Z2 209 aaKnown RBP8.05□□□□□ -1.12
SMG6-210ENST00000572205 CXorf21Q9HAI6 301 aa8.05□□□□□ -1.12
SMG6-210ENST00000572205 MID1IP1Q9NPA3 183 aa8.05□□□□□ -1.12
SMG6-210ENST00000572205 PNO1Q9NRX1 252 aaKnown RBP8.05□□□□□ -1.12
SMG6-210ENST00000572205 MS4A12Q9NXJ0 267 aa8.05□□□□□ -1.12
SMG6-210ENST00000572205 MCM8Q9UJA3 840 aa8.05□□□□□ -1.12
SMG6-210ENST00000572205 G3BP2Q9UN86 482 aaKnown RBP8.05□□□□□ -1.12
SMG6-210ENST00000572205 SNX6Q9UNH7 406 aa8.05□□□□□ -1.12
SMG6-210ENST00000572205 PHF3Q92576 2039 aaKnown RBP8.05□□□□□ -1.12
SMG6-210ENST00000572205 PINLYPA6NC86 204 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 SYNDIG1LA6NDD5 238 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 WIPF3A6NGB9 483 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 A8MUI8 341 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 CLDN4O14493 209 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 ITGA10O75578 1167 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 OR6B1O95007 311 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 CBX7O95931 251 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 ATP1B1P05026 303 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 SLC35E2P0CK97 266 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 ALOX15P16050 662 aaPredicted RBP8.04□□□□□ -1.12
SMG6-210ENST00000572205 TACR1P25103 407 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 SERPINB3P29508 390 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 CCT5P48643 541 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 HLCSP50747 726 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 CLCN2P51788 898 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 RNF4P78317 190 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 PHEXP78562 749 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 PLIN5Q00G26 463 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 RELBQ01201 579 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 FUT7Q11130 342 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 MPEG1Q2M385 716 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 PRICKLE4Q2TBC4 344 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 ZNF766Q5HY98 468 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 FHL5Q5TD97 284 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 FAM180BQ6P0A1 224 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 SCIMPQ6UWF3 145 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 CCNYL1Q8N7R7 359 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 GBP7Q8N8V2 638 aaPredicted RBP8.04□□□□□ -1.12
SMG6-210ENST00000572205 ST6GALNAC3Q8NDV1 305 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 NUBPLQ8TB37 319 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 METTL6Q8TCB7 284 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 FAR1Q8WVX9 515 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 TANKQ92844 425 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 ATP6V1E2Q96A05 226 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 ITPKCQ96DU7 683 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 CCDC126Q96EE4 140 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 SENP5Q96HI0 755 aaPredicted RBP8.04□□□□□ -1.12
SMG6-210ENST00000572205 HSH2DQ96JZ2 352 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 PKNOX2Q96KN3 472 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 OR8D2Q9GZM6 311 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 PROK2Q9HC23 129 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 SSU72Q9NP77 194 aaKnown RBP8.04□□□□□ -1.12
SMG6-210ENST00000572205 SLAMF7Q9NQ25 335 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 STMN3Q9NZ72 180 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 MAT2BQ9NZL9 334 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 ABI3Q9P2A4 366 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 MYOTQ9UBF9 498 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 VPS29Q9UBQ0 182 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 DLGAP4Q9Y2H0 992 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 STK38LQ9Y2H1 464 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 DNAJC15Q9Y5T4 150 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 PCNX1Q96RV3 2341 aa8.04□□□□□ -1.12
SMG6-210ENST00000572205 PCNX3Q9H6A9 2034 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 NINQ8N4C6 2090 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 DYTNA2CJ06 578 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 B4DXG7 233 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 LSM1O15116 133 aaKnown RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 PCDH7O60245 1069 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 NPHS1O60500 1241 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 TRIM13O60858 407 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 ULK1O75385 1050 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 SLC25A12O75746 678 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 OR2J2O76002 312 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 RSL1D1O76021 490 aaKnown RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 PSMG1O95456 288 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 KRT6AP02538 564 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 KRT6BP04259 564 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 BPGMP07738 259 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 IL3P08700 152 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 EDN3P14138 238 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 CPMP14384 443 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 SSTR4P31391 388 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 BUD31P41223 144 aaPredicted RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 SOX3P41225 446 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 KRT6CP48668 564 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 MAPK12P53778 367 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 TRA2BP62995 288 aaKnown RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 ERVK-8P63133 956 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 ACTN3Q08043 901 aaPredicted RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 RCN2Q14257 317 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 LTB4RQ15722 352 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 ZNF791Q3KP31 576 aaPredicted RBP8.03□□□□□ -1.12
SMG6-210ENST00000572205 ZNF628Q5EBL2 1059 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 IRAK1BP1Q5VVH5 260 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 FAM71E1Q6IPT2 247 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 CYP20A1Q6UW02 462 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 GALNTL5Q7Z4T8 443 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 JAZF1Q86VZ6 243 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 TMEM132CQ8N3T6 1108 aa8.03□□□□□ -1.12
SMG6-210ENST00000572205 CPSF7Q8N684 471 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms