RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 GPA33Q99795 319 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 GDF15Q99988 308 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 KATNB1Q9BVA0 655 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 NDRG2Q9UN36 371 aaKnown RBP16.54■□□□□ 0.24
SCARF1-205ENST00000571272 TMA7Q9Y2S6 64 aaKnown RBP16.54■□□□□ 0.24
SCARF1-205ENST00000571272 GPR52Q9Y2T5 361 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 OR6C70A6NIJ9 312 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 NOTOA8MTQ0 251 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 POLR1CO15160 346 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-205ENST00000571272 MMP11P24347 488 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 SLC9A3P48764 834 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 SNAPC1Q16533 368 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 LIPIQ6XZB0 460 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 PRR23CQ6ZRP0 262 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 ZER1Q7Z7L7 766 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 TMC8Q8IU68 726 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 OR5D16Q8NGK9 328 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 OR52P1PQ8NH57 321 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 XAGE5Q8WWM1 108 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 UCN3Q969E3 161 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 ZNF582Q96NG8 517 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-205ENST00000571272 A4GALTQ9NPC4 353 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 RPRD1BQ9NQG5 326 aaKnown RBP16.54■□□□□ 0.24
SCARF1-205ENST00000571272 DIMT1Q9UNQ2 313 aaKnown RBP16.54■□□□□ 0.24
SCARF1-205ENST00000571272 WASH3PC4AMC7 463 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 EPHX1P07099 455 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 OR12D1P0DN82 309 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 CPEP16870 476 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 PTGER1P34995 402 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 IRS1P35568 1242 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 GIPRP48546 466 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 GALK2Q01415 458 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 TYW3Q6IPR3 259 aaKnown RBP16.53■□□□□ 0.24
SCARF1-205ENST00000571272 IQCHQ86VS3 1027 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 CLDN22Q8N7P3 220 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 GDPD1Q8N9F7 314 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 FAM181AQ8N9Y4 354 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 TREX2Q9BQ50 279 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-205ENST00000571272 KCNK12Q9HB15 430 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 A4GNTQ9UNA3 340 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 ICKQ9UPZ9 632 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 PDPK1O15530 556 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 TYRP14679 529 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 MYL12AP19105 171 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 DDCP20711 480 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 TM4SF4P48230 202 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 MAN2A2P49641 1150 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 QPRTQ15274 297 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 LRRC56Q8IYG6 542 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-205ENST00000571272 SLC39A11Q8N1S5 342 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 FAM26EQ8N5C1 309 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 GALNT6Q8NCL4 622 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 OR4K5Q8NGD3 323 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 ZNF558Q96NG5 402 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 PRKAB1Q9Y478 270 aa16.53■□□□□ 0.24
SCARF1-205ENST00000571272 PRAMEF27A3QJZ7 478 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 CPNE3O75131 537 aaKnown RBP16.52■□□□□ 0.24
SCARF1-205ENST00000571272 TBX6O95947 436 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-205ENST00000571272 MYCP01106 439 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-205ENST00000571272 TRAPPC2P0DI81 140 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 TRAPPC2BP0DI82 140 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 CNTN1Q12860 1018 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 IKBIPQ70UQ0 350 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 CADM2Q8N3J6 435 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 VN1R2Q8NFZ6 395 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 OR5P2Q8WZ92 322 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 TM4SF18Q96CE8 201 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 SERHL2Q9H4I8 314 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 TESQ9UGI8 421 aaKnown RBP16.52■□□□□ 0.24
SCARF1-205ENST00000571272 CLCA3PQ9Y6N3 262 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 PLXNA2O75051 1894 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 TGM5O43548 720 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 MMP20O60882 483 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 LRG1P02750 347 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 NR2F6P10588 404 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 PSKH1P11801 424 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 CD79BP40259 229 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 WNT4P56705 351 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 CAMK2BQ13554 666 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 NFE2L1Q14494 772 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 YIF1BQ5BJH7 314 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 PRAMEF14Q5SWL7 426 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 PRAMEF13Q5VWM6 474 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 SYCE2Q6PIF2 218 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 RAET1EQ8TD07 263 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 SLC9A6Q92581 669 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 ZNF689Q96CS4 500 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-205ENST00000571272 DHRS1Q96LJ7 313 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 FNDC11Q9BVV2 318 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 POLDIP3Q9BY77 421 aaKnown RBP16.52■□□□□ 0.24
SCARF1-205ENST00000571272 PLA2G12AQ9BZM1 189 aa16.52■□□□□ 0.24
SCARF1-205ENST00000571272 A0A0G2JN53 185 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 WASHC1A8K0Z3 465 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 LGI1O95970 557 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 CCNYL3P0C7X3 344 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 METAP1P53582 386 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 SP3Q02447 781 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 CLPPQ16740 277 aaPredicted RBP16.52■□□□□ 0.23
SCARF1-205ENST00000571272 CCDC58Q4VC31 144 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms