RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 CTNSO60931 367 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 GUCY1B2O75343 617 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 CRYABP02511 175 aaKnown RBP12.42□□□□□ -0.42
CCDC40-205ENST00000571028 IL3P08700 152 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 TNNI3P19429 210 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 PPP2R1BP30154 601 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 KRTAP10-9P60411 292 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 TLE4Q04727 773 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 ATP6AP1LQ52LC2 224 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 RFTN2Q52LD8 501 aaPredicted RBP12.42□□□□□ -0.42
CCDC40-205ENST00000571028 NDUFAF5Q5TEU4 345 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 NOXRED1Q6NXP6 359 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 CPEB2Q7Z5Q1 589 aaKnown RBP12.42□□□□□ -0.42
CCDC40-205ENST00000571028 FNDC5Q8NAU1 212 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 CLHC1Q8NHS4 586 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 FAM76AQ8TAV0 307 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 DOK4Q8TEW6 326 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 C16orf78Q8WTQ4 265 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 GFM2Q969S9 779 aaKnown RBP12.42□□□□□ -0.42
CCDC40-205ENST00000571028 TM4SF18Q96CE8 201 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 C14orf79Q96F83 325 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 THOC1Q96FV9 657 aaKnown RBP12.42□□□□□ -0.42
CCDC40-205ENST00000571028 PPP3R2Q96LZ3 170 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 MAGEB18Q96M61 343 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 LMF1Q96S06 567 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 FAIM2Q9BWQ8 316 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 PFDN4Q9NQP4 134 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 MS4A12Q9NXJ0 267 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 C19orf25Q9UFG5 118 aaPredicted RBP12.42□□□□□ -0.42
CCDC40-205ENST00000571028 DLGAP4Q9Y2H0 992 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 MMACHCQ9Y4U1 282 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 CCDC88CQ9P219 2028 aa12.42□□□□□ -0.42
CCDC40-205ENST00000571028 NSG1A0A0A6YYJ2 146 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 TGFBR3LH3BV60 316 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 AKAP10O43572 662 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 ERAL1O75616 437 aaKnown RBP12.41□□□□□ -0.42
CCDC40-205ENST00000571028 LRATO95237 230 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 HSD17B7P56937 341 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 GUCY1A3Q02108 690 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 C2orf80Q0P641 193 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 SF3A3Q12874 501 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC40-205ENST00000571028 XKR7Q5GH72 579 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 ZNF324BQ6AW86 544 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-205ENST00000571028 NXNQ6DKJ4 435 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 FAM180BQ6P0A1 224 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 TMEM205Q6UW68 189 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 DCHS2Q6V1P9 2916 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 QSOX2Q6ZRP7 698 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 WDR75Q8IWA0 830 aaKnown RBP12.41□□□□□ -0.42
CCDC40-205ENST00000571028 HOMEZQ8IX15 550 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 PLPP5Q8NEB5 264 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 OR11G2Q8NGC1 345 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 TSSK3Q96PN8 268 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 ALOXE3Q9BYJ1 711 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC40-205ENST00000571028 WDR55Q9H6Y2 383 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-205ENST00000571028 BAIAP2L1Q9UHR4 511 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 HAO1Q9UJM8 370 aa12.41□□□□□ -0.42
CCDC40-205ENST00000571028 SCN2AQ99250 2005 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 IGHV1-45A0A0A0MS14 117 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 A0A1W2PS29 197 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 CLDN14O95500 239 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 COX6A1P12074 109 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 AGAP20933 346 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 TACR1P25103 407 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 HK2P52789 917 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 ART1P52961 327 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 TRA2BP62995 288 aaKnown RBP12.4□□□□□ -0.42
CCDC40-205ENST00000571028 FOLH1Q04609 750 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 ZNF763Q0D2J5 394 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 PCOLCEQ15113 449 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 ZNF750Q32MQ0 723 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 C6orf136Q5SQH8 315 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 IL23RQ5VWK5 629 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 OR52E8Q6IFG1 317 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 PAPD4Q6PIY7 484 aaKnown RBP12.4□□□□□ -0.42
CCDC40-205ENST00000571028 SCUBE1Q8IWY4 988 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 KIRREL3Q8IZU9 778 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 TMEM132CQ8N3T6 1108 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 SUN3Q8TAQ9 357 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 PIWIL2Q8TC59 973 aaKnown RBP12.4□□□□□ -0.42
CCDC40-205ENST00000571028 EXOSC8Q96B26 276 aaKnown RBP12.4□□□□□ -0.42
CCDC40-205ENST00000571028 ANKRD9Q96BM1 317 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-205ENST00000571028 PPWD1Q96BP3 646 aaKnown RBP12.4□□□□□ -0.42
CCDC40-205ENST00000571028 MAGED4Q96JG8 741 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 EGLN2Q96KS0 407 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 C7orf26Q96N11 449 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 TAAR6Q96RI8 345 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 AKTIPQ9H8T0 292 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 MCCC2Q9HCC0 563 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 HEY2Q9UBP5 337 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 PCDHA9Q9Y5H5 950 aa12.4□□□□□ -0.42
CCDC40-205ENST00000571028 MED13LQ71F56 2210 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 IGKV3D-11A0A0A0MRZ8 115 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 TCRBV16S1A1N1A0A5B0 115 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 C1orf226A1L170 272 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 HDAC3O15379 428 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 OR10H2O60403 315 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 SLC19A2O60779 497 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 RASAL1O95294 804 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms