RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 COMMD6Q7Z4G1 85 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 MCEMP1Q8IX19 187 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 GALNT12Q8IXK2 581 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 MARVELD2Q8N4S9 558 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TMEM251Q8N6I4 163 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 OR7G1Q8NGA0 311 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 OR4K14Q8NGD5 310 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SECISBP2Q96T21 854 aaKnown RBP15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SPOCK3Q9BQ16 436 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CNPPD1Q9BV87 410 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PROK2Q9HC23 129 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TUBA8Q9NY65 449 aaPredicted RBP15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 STK38LQ9Y2H1 464 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PCDHGB3Q9Y5G1 929 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PCDHA9Q9Y5H5 950 aa15.75■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PDZD2O15018 2839 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 WASHC1A8K0Z3 465 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PPP6CO00743 305 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 AQP7O14520 342 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ZNHIT1O43257 154 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PDYNP01213 254 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 GBAP04062 536 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ATP1B1P05026 303 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 KLK1P06870 262 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CPMP14384 443 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 IMPDH1P20839 514 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 MAGEA5P43359 124 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 MAPK12P53778 367 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CSTF3Q12996 717 aaKnown RBP15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 RASA2Q15283 850 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TBCELQ5QJ74 424 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TRILQ7L0X0 811 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 GDF7Q7Z4P5 450 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SLC22A9Q8IVM8 553 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TAGAPQ8N103 731 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 LRRC25Q8N386 305 aaPredicted RBP15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ZNF615Q8N8J6 731 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 UHMK1Q8TAS1 419 aaKnown RBP15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 MZB1Q8WU39 189 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ASB5Q8WWX0 329 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 NTNG2Q96CW9 530 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 L3HYPDHQ96EM0 354 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ENKD1Q9H0I2 346 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 DEFB127Q9H1M4 99 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 EPB41L4BQ9H329 900 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 FARSBQ9NSD9 589 aaKnown RBP15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 COQ3Q9NZJ6 369 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TMEM216Q9P0N5 145 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PSMC3IPQ9P2W1 217 aaPredicted RBP15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SLC12A4Q9UP95 1085 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CSMD1Q96PZ7 3565 aa15.74■□□□□ 0.11
MAP1LC3B-208ENST00000570189 C2orf92A0A1B0GVN3 265 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SERTM1A2A2V5 107 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 FAM166BA8MTA8 275 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CAPN14A8MX76 684 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 DLX3O60479 287 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 KRT6AP02538 564 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 KRT6BP04259 564 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 COX6B1P14854 86 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 PORP16435 677 aaPredicted RBP15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 S1PR1P21453 382 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ATP5F1P24539 256 aaPredicted RBP15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TNFRSF8P28908 595 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 KRT6CP48668 564 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 DNASE1L1P49184 302 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TMED10P49755 219 aaKnown RBP15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 XKP51811 444 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CDH13P55290 713 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 NAA20P61599 178 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 MAP4K2Q12851 820 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 UNC50Q53HI1 259 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TMEM81Q6P7N7 255 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 NCCRP1Q6ZVX7 275 aaPredicted RBP15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ACAD11Q709F0 780 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 RPS27LQ71UM5 84 aaKnown RBP15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SELENOMQ8WWX9 145 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 UCN3Q969E3 161 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ADIPOR1Q96A54 375 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TM4SF18Q96CE8 201 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TMEM237Q96Q45 408 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 GAL3ST4Q96RP7 486 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SMC6Q96SB8 1091 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 TRIM8Q9BZR9 551 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ZNF703Q9H7S9 590 aaPredicted RBP15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ZFP64Q9NPA5 681 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ACKR4Q9NPB9 350 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 VPS29Q9UBQ0 182 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ZNF639Q9UID6 485 aa15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CNOT11Q9UKZ1 510 aaKnown RBP15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 BOKQ9UMX3 212 aaPredicted RBP15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.73■□□□□ 0.11
MAP1LC3B-208ENST00000570189 A0A1W2PS29 197 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 GOLGA6L10A6NI86 522 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 FIGNL2A6NMB9 653 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 ENO4A6NNW6 628 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 OR4F21O95013 312 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 HOXD4P09016 255 aaPredicted RBP15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 CT62P0C5K7 136 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 IGFBP2P18065 325 aa15.72■□□□□ 0.11
MAP1LC3B-208ENST00000570189 SSTR4P31391 388 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms