RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 ZNF396Q96N95 335 aaPredicted RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 GUCD1Q96NT3 240 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 MTERF1Q99551 399 aaKnown RBP4.24□□□□□ -1.73
CHD9-220ENST00000569794 BPIFA3Q9BQP9 254 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 CALHM2Q9HA72 323 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 NEK6Q9HC98 313 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 MMP25Q9NPA2 562 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 CNGB3Q9NQW8 809 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 CHRAC1Q9NRG0 131 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 ACOXLQ9NUZ1 547 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 ONECUT1Q9UBC0 465 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 BCAP29Q9UHQ4 241 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 FBXL2Q9UKC9 423 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 WDR83OSQ9Y284 106 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 IFT52Q9Y366 437 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 LOXL2Q9Y4K0 774 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 GMEB1Q9Y692 573 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 PRSS21Q9Y6M0 314 aa4.24□□□□□ -1.73
CHD9-220ENST00000569794 ASB14A6NK59 587 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 E5RGE8 158 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 ABCD4O14678 606 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 KCNN4O15554 427 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 ARHGEF9O43307 516 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 AKR7A2O43488 359 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 LCMT2O60294 686 aaKnown RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 SDC3O75056 442 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CDH16O75309 829 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 FHP07954 510 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 ERVK-10P10266 1014 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 ODC1P11926 461 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 GOT1P17174 413 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CPN2P22792 545 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CD1BP29016 333 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 AXLP30530 894 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 USP8P40818 1118 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CDKN1BP46527 198 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 RPL21P46778 160 aaKnown RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 SLC11A1P49279 550 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 STARP49675 285 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CTSCP53634 463 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 RAD23BP54727 409 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CACNG1Q06432 222 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 RASGEF1BQ0VAM2 473 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CDH18Q13634 790 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 P2RY14Q15391 338 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 PDLIM3Q53GG5 364 aaPredicted RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 ZNF311Q5JNZ3 666 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 SLC35E4Q6ICL7 350 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 ZNF770Q6IQ21 691 aaPredicted RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 TTC27Q6P3X3 843 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 NIPAL3Q6P499 406 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 FUT10Q6P4F1 479 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CBLN3Q6UW01 205 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CEACAM20Q6UY09 585 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 BZW1Q7L1Q6 419 aaKnown RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 EIF3MQ7L2H7 374 aaKnown RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 SERINC5Q86VE9 423 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CDR2LQ86X02 465 aaPredicted RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 CCDC60Q8IWA6 550 aaPredicted RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 KATNAL2Q8IYT4 538 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 BMPERQ8N8U9 685 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 SPATA4Q8NEY3 305 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 FAM81AQ8TBF8 368 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 SEMA4DQ92854 862 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 GLYATL1Q969I3 302 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 TAAR8Q969N4 342 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 TMIGD2Q96BF3 282 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 PINX1Q96BK5 328 aaKnown RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 CXorf58Q96LI9 332 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 GPR137Q96N19 417 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 ATOH8Q96SQ7 321 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CHP1Q99653 195 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 CBWD1Q9BRT8 395 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 HAUS8Q9BT25 410 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 LRRC1Q9BTT6 524 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 LRRC2Q9BYS8 371 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 ZDHHC6Q9H6R6 413 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 KCNK13Q9HB14 408 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 SGK2Q9HBY8 427 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 PCDH9Q9HC56 1237 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 GKN1Q9NS71 199 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 TMEM30AQ9NV96 361 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 MIOSQ9NXC5 875 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 B3GAT1Q9P2W7 334 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 ANGPTL2Q9UKU9 493 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 PACSIN2Q9UNF0 486 aaPredicted RBP4.23□□□□□ -1.73
CHD9-220ENST00000569794 NSG2Q9Y328 171 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 SLCO1B1Q9Y6L6 691 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 RAD54L2Q9Y4B4 1467 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 RB1CC1Q8TDY2 1594 aa4.23□□□□□ -1.73
CHD9-220ENST00000569794 A0A087WUV0 522 aaPredicted RBP4.22□□□□□ -1.73
CHD9-220ENST00000569794 LOC100506127A0A0U1RQW1 187 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 CCDC162PA2VCL2 907 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 OR2M5A3KFT3 312 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 METTL21EPA6NDL7 271 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 CASTOR2A6NHX0 329 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 OR2AG2A6NM03 316 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 WASH3PC4AMC7 463 aa4.22□□□□□ -1.73
CHD9-220ENST00000569794 HSBP1L1C9JCN9 74 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms