RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 MBD3L5A6NJ08 208 aaPredicted RBP13.55□□□□□ -0.24
USB1-214ENST00000568848 PLPP1O14494 284 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 SNPHO15079 494 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 OR10H2O60403 315 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 STK16O75716 305 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 CCDC166P0CW27 439 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 CD1DP15813 335 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 CPOXP36551 454 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 MASP1P48740 699 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 STARP49675 285 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 PLIN5Q00G26 463 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 SLC29A4Q7RTT9 530 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 ZNF441Q8N8Z8 693 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 MBD3L2Q8NHZ7 208 aaPredicted RBP13.55□□□□□ -0.24
USB1-214ENST00000568848 SPPL2AQ8TCT8 520 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 INTS12Q96CB8 462 aaKnown RBP13.55□□□□□ -0.24
USB1-214ENST00000568848 HSPBAP1Q96EW2 488 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 WDR34Q96EX3 536 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 RBM18Q96H35 190 aaKnown RBP13.55□□□□□ -0.24
USB1-214ENST00000568848 TBCDQ9BTW9 1192 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 TRIM31Q9BZY9 425 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 CNIH4Q9P003 139 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 CORO1CQ9ULV4 474 aaPredicted RBP13.55□□□□□ -0.24
USB1-214ENST00000568848 HEATR5AQ86XA9 2040 aa13.55□□□□□ -0.24
USB1-214ENST00000568848 USF3Q68DE3 2245 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 IQANK1A0A1B0GTG1 560 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 A0A1W2PR48 441 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 NME6O75414 186 aaPredicted RBP13.54□□□□□ -0.24
USB1-214ENST00000568848 SCELO95171 688 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 HPNP05981 417 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 SERPINB3P29508 390 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 CPA2P48052 419 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 PIK3CGP48736 1102 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 FNTAP49354 379 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 GNG11P61952 73 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 RPS13P62277 151 aaKnown RBP13.54□□□□□ -0.24
USB1-214ENST00000568848 TGM3Q08188 693 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 MGAT5Q09328 741 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 DLG1Q12959 904 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 RCN2Q14257 317 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 KHDRBS2Q5VWX1 349 aaKnown RBP13.54□□□□□ -0.24
USB1-214ENST00000568848 OR4C11Q6IEV9 310 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 P3H2Q8IVL5 708 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 KLHL7Q8IXQ5 586 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 FBXO36Q8NEA4 188 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 FAM83FQ8NEG4 500 aaPredicted RBP13.54□□□□□ -0.24
USB1-214ENST00000568848 OR7G3Q8NG95 312 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 ANP32BQ92688 251 aaKnown RBP13.54□□□□□ -0.24
USB1-214ENST00000568848 RIT1Q92963 219 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 ABTB1Q969K4 478 aaPredicted RBP13.54□□□□□ -0.24
USB1-214ENST00000568848 HS3ST6Q96QI5 342 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 NODALQ96S42 347 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 MTERF1Q99551 399 aaKnown RBP13.54□□□□□ -0.24
USB1-214ENST00000568848 MCMBPQ9BTE3 642 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 G6PC3Q9BUM1 346 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 EFCAB11Q9BUY7 163 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 ZNF717Q9BY31 904 aaPredicted RBP13.54□□□□□ -0.24
USB1-214ENST00000568848 EHD1Q9H4M9 534 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 UBTD1Q9HAC8 227 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 GALNT9Q9HCQ5 603 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 BEX4Q9NWD9 120 aaPredicted RBP13.54□□□□□ -0.24
USB1-214ENST00000568848 KLHL28Q9NXS3 571 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 EDARQ9UNE0 448 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 MAPRE3Q9UPY8 281 aa13.54□□□□□ -0.24
USB1-214ENST00000568848 GOLGA6L10A0A0M3HER8 536 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 CD8B2A6NJW9 211 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 UBXN8O00124 270 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 CES2O00748 559 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 TP73O15350 636 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 AIFM1O95831 613 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 PTPN6P29350 595 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 GGT5P36269 586 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 CASP3P42574 277 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 NR1H2P55055 460 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 FAM27E3Q08E93 113 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 PDIA2Q13087 525 aaKnown RBP13.53□□□□□ -0.24
USB1-214ENST00000568848 RPS6KA2Q15349 733 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 ANGPTL8Q6UXH0 198 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 YTHDF3Q7Z739 585 aaKnown RBP13.53□□□□□ -0.24
USB1-214ENST00000568848 GPR180Q86V85 440 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 KIF18BQ86Y91 864 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 MYLK4Q86YV6 388 aaPredicted RBP13.53□□□□□ -0.24
USB1-214ENST00000568848 HUS1BQ8NHY5 278 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 GRK7Q8WTQ7 553 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 LRRC46Q96FV0 321 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 NAT9Q9BTE0 207 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 DERL2Q9GZP9 239 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 RHOJQ9H4E5 214 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 ALG9Q9H6U8 611 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 SERHLQ9NQF3 203 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 QPCTLQ9NXS2 382 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 PTBP2Q9UKA9 531 aaKnown RBP13.53□□□□□ -0.24
USB1-214ENST00000568848 PCDHGB3Q9Y5G1 929 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 SPACA6W5XKT8 324 aa13.53□□□□□ -0.24
USB1-214ENST00000568848 PRR14LQ5THK1 2151 aa13.52□□□□□ -0.24
USB1-214ENST00000568848 C2orf92A0A1B0GVN3 265 aa13.52□□□□□ -0.25
USB1-214ENST00000568848 DEFB108AA8MXU0 73 aa13.52□□□□□ -0.25
USB1-214ENST00000568848 PGRMC2O15173 223 aa13.52□□□□□ -0.25
USB1-214ENST00000568848 SMPD2O60906 423 aa13.52□□□□□ -0.25
USB1-214ENST00000568848 TCP1P17987 556 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms