RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ZC3HAV1LQ96H79 300 aaKnown RBP8.87□□□□□ -0.99
CAPN3-216ENST00000567071 GPR21Q99679 349 aa8.87□□□□□ -0.99
CAPN3-216ENST00000567071 VPS11Q9H270 941 aa8.87□□□□□ -0.99
CAPN3-216ENST00000567071 ZNF703Q9H7S9 590 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-216ENST00000567071 SH2D2AQ9NP31 389 aa8.87□□□□□ -0.99
CAPN3-216ENST00000567071 LANCL2Q9NS86 450 aa8.87□□□□□ -0.99
CAPN3-216ENST00000567071 SPATA7Q9P0W8 599 aa8.87□□□□□ -0.99
CAPN3-216ENST00000567071 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
CAPN3-216ENST00000567071 PACSIN3Q9UKS6 424 aa8.87□□□□□ -0.99
CAPN3-216ENST00000567071 CORO1CQ9ULV4 474 aaPredicted RBP8.87□□□□□ -0.99
CAPN3-216ENST00000567071 A0A096LPK6 155 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 HMGB1P1B2RPK0 211 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-216ENST00000567071 SLC35E2BP0CK96 405 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 STMN1P16949 149 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 CHRM3P20309 590 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 TYK2P29597 1187 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 MAGEA12P43365 314 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 PCYT1AP49585 367 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 IRF9Q00978 393 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 TIAL1Q01085 375 aaKnown RBP eCLIP8.86□□□□□ -0.99
CAPN3-216ENST00000567071 POU4F1Q01851 419 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 RELAQ04206 551 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 LOXL1Q08397 574 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-216ENST00000567071 TBL3Q12788 808 aaKnown RBP8.86□□□□□ -0.99
CAPN3-216ENST00000567071 HYAL2Q12891 473 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 PHKG1Q16816 387 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 TNFAIP8L3Q5GJ75 292 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 CLEC2AQ6UVW9 174 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 SCIMPQ6UWF3 145 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 EXOC3L1Q86VI1 746 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 APCDD1LQ8NCL9 501 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 NFAM1Q8NET5 270 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-216ENST00000567071 GIMAP7Q8NHV1 300 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 ZCCHC10Q8TBK6 192 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 WNT2BQ93097 391 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 C1orf159Q96HA4 380 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 FOPNLQ96NB1 174 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 SLC30A3Q99726 388 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 TIMP4Q99727 224 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 TM9SF2Q99805 663 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 PRDM14Q9GZV8 571 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 MED4Q9NPJ6 270 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.86□□□□□ -0.99
CAPN3-216ENST00000567071 GALPQ9UBC7 116 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 TRMT6Q9UJA5 497 aaKnown RBP8.86□□□□□ -0.99
CAPN3-216ENST00000567071 MED16Q9Y2X0 877 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 VWA7Q9Y334 891 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 ATG4BQ9Y4P1 393 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 COMMD10Q9Y6G5 202 aa8.86□□□□□ -0.99
CAPN3-216ENST00000567071 A0A1W2PPV9 198 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 FAM234BA2RU67 622 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 C3orf80F5H4A9 247 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 H3BMM5 538 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 MSTNO14793 375 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 MYO1DO94832 1006 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 C2P06681 752 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 KRT4P19013 534 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 RBMXP38159 391 aaKnown RBP8.85□□□□□ -0.99
CAPN3-216ENST00000567071 CD79BP40259 229 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 GZMKP49863 264 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 CRYZQ08257 329 aaKnown RBP8.85□□□□□ -0.99
CAPN3-216ENST00000567071 FAM27E3Q08E93 113 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 DUSP8Q13202 625 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 GAB1Q13480 694 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 TERF2Q15554 542 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 ZKSCAN8Q15776 578 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-216ENST00000567071 OPN5Q6U736 354 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 LYPD8Q6UX82 237 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 SEZ6L2Q6UXD5 910 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 TIFABQ6ZNK6 161 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 QSOX2Q6ZRP7 698 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 SH2D5Q6ZV89 423 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 CPNE9Q8IYJ1 553 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 C9orf106Q8NAJ2 232 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 CAMKVQ8NCB2 501 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 CD200R1Q8TD46 325 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 SMPDL3AQ92484 453 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 KCNJ9Q92806 393 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 APOPT1Q96IL0 206 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 RASL10BQ96S79 203 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 SLC39A3Q9BRY0 314 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 ZFP64Q9NPA5 681 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 TAS2R13Q9NYV9 303 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 PLA2G2EQ9NZK7 142 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 SENP1Q9P0U3 644 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 NAALAD2Q9Y3Q0 740 aa8.85□□□□□ -0.99
CAPN3-216ENST00000567071 NCKAP5O14513 1909 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 TCRBV16S1A1N1A0A5B0 115 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 ZNF860A6NHJ4 632 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 OVOL3O00110 214 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 PSMD12O00232 456 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 COPEO14579 308 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 HAT1O14929 419 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 SMNDC1O75940 238 aaKnown RBP eCLIP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 WISP3O95389 354 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 IGHV4-39P01824 125 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 CYP4B1P13584 511 aa8.84□□□□□ -0.99
CAPN3-216ENST00000567071 ZNF37AP17032 561 aaPredicted RBP8.84□□□□□ -0.99
CAPN3-216ENST00000567071 GDF1P27539 372 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms