RNA–Protein interactions for RNA: ENST00000566047.5

CMC2-215, Transcript of C-X9-C motif containing 2, human

TSL 2

Gene CMC2, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-215	ENST00000566047	SLIT2	O94813	1529 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	USP32	Q8NFA0	1604 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047		A0A1W2PR80	420 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047		E5RGE8	158 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047		F8WDY8	70 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	NPIPA3	F8WFD2	350 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	ADAM12	O43184	909 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	LANCL1	O43813	399 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	SEC24A	O95486	1093 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	HSPA5	P11021	654 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	CPA3	P15088	417 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	PRKACG	P22612	351 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	MDH1	P40925	334 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	ASMT	P46597	345 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	MAZ	P56270	477 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	GUCY2D	Q02846	1103 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	ELP6	Q0PNE2	266 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	CETN1	Q12798	172 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	PPP1R8	Q12972	351 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	ABR	Q12979	859 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	PEX6	Q13608	980 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	CDH18	Q13634	790 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	HERC3	Q15034	1050 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	PHKG1	Q16816	387 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	MOGAT2	Q3SYC2	334 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	GPR33	Q49SQ1	333 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	PDLIM3	Q53GG5	364 aa	Predicted RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	HSP90AA5P	Q58FG0	334 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	RAET1G	Q6H3X3	334 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	IRGC	Q6NXR0	463 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	FUT10	Q6P4F1	479 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047		Q6ZR54	194 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	ARMCX2	Q7L311	632 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	CPEB2	Q7Z5Q1	589 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	ZC3H3	Q8IXZ2	948 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	THEM5	Q8N1Q8	247 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	POM121L12	Q8N7R1	296 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	BANP	Q8N9N5	519 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	SIDT2	Q8NBJ9	832 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	NOA1	Q8NC60	698 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	GPRC5A	Q8NFJ5	357 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	OR56B1	Q8NGI3	324 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	SLC26A7	Q8TE54	656 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	GATAD1	Q8WUU5	269 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	HAS2	Q92819	552 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	C14orf79	Q96F83	325 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	TAAR6	Q96RI8	345 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	CRACR2A	Q9BSW2	395 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	URM1	Q9BTM9	101 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	RAB17	Q9H0T7	212 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	THAP2	Q9H0W7	228 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	ECT2	Q9H8V3	914 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	RAVER2	Q9HCJ3	691 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	TEX10	Q9NXF1	929 aa	Predicted RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	SPHK1	Q9NYA1	384 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	OR6C2	Q9NZP2	312 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	ANKMY1	Q9P2S6	941 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	FAM153A	Q9UHL3	310 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	RARRES3	Q9UL19	164 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	DUSP12	Q9UNI6	340 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	PLA2G4C	Q9UP65	541 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	NSG2	Q9Y328	171 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	RRP15	Q9Y3B9	282 aa	Known RBP	2.58	□□□□□ -2
CMC2-215	ENST00000566047	CRYBG1	Q9Y4K1	1723 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	ARHGEF10	O15013	1369 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	KIAA1217	Q5T5P2	1943 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	BCL9L	Q86UU0	1499 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	TULP4	Q9NRJ4	1543 aa		2.58	□□□□□ -2
CMC2-215	ENST00000566047	TOPAZ1	Q8N9V7	1692 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	ABCA3	Q99758	1704 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	COL14A1	Q05707	1796 aa	Known RBP	2.57	□□□□□ -2
CMC2-215	ENST00000566047	BRWD3	Q6RI45	1802 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	TMEM89	A2RUT3	159 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	C2CD4D	B7Z1M9	353 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	MPHOSPH10	O00566	681 aa	Known RBP	2.57	□□□□□ -2
CMC2-215	ENST00000566047	FPGT	O14772	594 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	MLNR	O43193	412 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	BCL2L11	O43521	198 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	SCO2	O43819	266 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	GLRA3	O75311	464 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	ATP6V1G1	O75348	118 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	GMNN	O75496	209 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	VTN	P04004	478 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	TPBGL	P0DKB5	382 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	DARS	P14868	501 aa	Known RBP	2.57	□□□□□ -2
CMC2-215	ENST00000566047	CDH3	P22223	829 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	GJB2	P29033	226 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	CCND2	P30279	289 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	HNMT	P50135	292 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	TNFSF10	P50591	281 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	TMEM50B	P56557	158 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	KLC1	Q07866	573 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	TRAP1	Q12931	704 aa	Known RBP	2.57	□□□□□ -2
CMC2-215	ENST00000566047	KRT31	Q15323	416 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	MAJIN	Q3KP22	176 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	ZNF542P	Q5EBM4	170 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	HERC4	Q5GLZ8	1057 aa	Predicted RBP	2.57	□□□□□ -2
CMC2-215	ENST00000566047	OR4C11	Q6IEV9	310 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	CTR9	Q6PD62	1173 aa		2.57	□□□□□ -2
CMC2-215	ENST00000566047	KIF6	Q6ZMV9	814 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms