RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KCTD19Q17RG1 926 aaPredicted RBP8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 TMEM249Q2WGJ8 235 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 HSP90AA5PQ58FG0 334 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 TEDDM1Q5T9Z0 273 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 UGT3A1Q6NUS8 523 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 LCTLQ6UWM7 567 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 UBE2R2Q712K3 238 aaPredicted RBP8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 TRMT10CQ7L0Y3 403 aaKnown RBP8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 PACS2Q86VP3 889 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 ANKMY2Q8IV38 441 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 GCNT2Q8N0V5 402 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 C2CD4AQ8NCU7 369 aaPredicted RBP8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 C7orf57Q8NEG2 295 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 CAVIN3Q969G5 261 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 CFAP36Q96G28 342 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF597Q96LX8 424 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 TUBA1CQ9BQE3 449 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 FUT8Q9BYC5 575 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 CCDC68Q9H2F9 335 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 BARX1Q9HBU1 254 aaPredicted RBP8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 PPANQ9NQ55 473 aaKnown RBP8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 GALPQ9UBC7 116 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 FETUBQ9UGM5 382 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 FBXO5Q9UKT4 447 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 NFU1Q9UMS0 254 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 MAPRE3Q9UPY8 281 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 CRYL1Q9Y2S2 319 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 WIF1Q9Y5W5 379 aa8.23□□□□□ -1.09
VPS9D1-205ENST00000565452 ARHGAP21Q5T5U3 1957 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 FRG2CA6NGY1 282 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 SERINC4A6NH21 518 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 CAPN14A8MX76 684 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 H0Y3Z8 333 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 UBFD1O14562 309 aaKnown RBP8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 TP53I11O14683 189 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 KLF4O43474 513 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 ADAM11O75078 769 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 BANF1O75531 89 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 TNFSF13O75888 250 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 AHSGP02765 367 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 ENO3P13929 434 aaPredicted RBP8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 TBXA2RP21731 343 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 ECHS1P30084 290 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 SSTR1P30872 391 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 MSH2P43246 934 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 NAGLUP54802 743 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 CASP9P55211 416 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 VLDLRP98155 873 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 RUNX2Q13950 521 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 SERTAD2Q14140 314 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 CSHL1Q14406 222 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 EFTUD2Q15029 972 aaKnown RBP eCLIP8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 EIPR1Q53HC9 387 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF470Q6ECI4 717 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 OR2A2Q6IF42 318 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 AGTRAPQ6RW13 159 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 ENPP6Q6UWR7 440 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 CYHR1Q6ZMK1 362 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 DNM1P46Q6ZS02 220 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF550Q7Z398 422 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 MEX3DQ86XN8 651 aaKnown RBP8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF321PQ8N8H1 164 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 OR10G3Q8NGC4 313 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 NUBPLQ8TB37 319 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 SLC2A12Q8TD20 617 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 LPGAT1Q92604 370 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 DIO2Q92813 273 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 STARD4Q96DR4 205 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 PGM2Q96G03 612 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 HS6ST2Q96MM7 605 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 GNRHR2Q96P88 292 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 CPNE1Q99829 537 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 SGPP1Q9BX95 441 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 KLHL31Q9H511 634 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 IARS2Q9NSE4 1012 aaKnown RBP8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 TXNDC16Q9P2K2 825 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 CNOT11Q9UKZ1 510 aaKnown RBP8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 SH2B3Q9UQQ2 575 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 ZNF281Q9Y2X9 895 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 CLDN16Q9Y5I7 305 aa8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 CHCHD2Q9Y6H1 151 aaPredicted RBP8.22□□□□□ -1.09
VPS9D1-205ENST00000565452 KIAA1549Q9HCM3 1950 aa8.21□□□□□ -1.09
VPS9D1-205ENST00000565452 A0A088AWK7 358 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 A0A1W2PNV4 684 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 TCRBV9S1A1TA0A576 114 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 FAM159BA6NKW6 160 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 C17orf105B2RV13 164 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 TGFBR3LH3BV60 316 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 EIF3FO00303 357 aaPredicted RBP8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 TCF21O43680 179 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 DYRK3O43781 588 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 B3GALT2O43825 422 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 PLAUP00749 431 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 FESP07332 822 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 SERPINA6P08185 405 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 ABHD2P08910 425 aa8.21□□□□□ -1.1
VPS9D1-205ENST00000565452 PPP3CBP16298 524 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms