RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 IGFL2Q6UWQ7 119 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 RNF111Q6ZNA4 994 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 DGAT2L6Q6ZPD8 337 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 SLC29A4Q7RTT9 530 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 LRRC34Q8IZ02 419 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 TMEM156Q8N614 296 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 HORMAD2Q8N7B1 307 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 CLHC1Q8NHS4 586 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 DOK4Q8TEW6 326 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 UTP23Q9BRU9 249 aaKnown RBP14.87□□□□□ -0.03
RAB40C-208ENST00000564703 ZBTB20Q9HC78 741 aaPredicted RBP14.87□□□□□ -0.03
RAB40C-208ENST00000564703 SLAMF7Q9NQ25 335 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 PLA2G3Q9NZ20 509 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 BCAP29Q9UHQ4 241 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 B3GNT3Q9Y2A9 372 aa14.87□□□□□ -0.03
RAB40C-208ENST00000564703 NBEAQ8NFP9 2946 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 LOC400499M0QZD8 3231 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 ZFYVE26Q68DK2 2539 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 A0A1W2PS29 197 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 DYNC1I1O14576 645 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 BCAS2O75934 225 aaPredicted RBP14.86□□□□□ -0.03
RAB40C-208ENST00000564703 WDPCPO95876 746 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 PRB1P04280 392 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 PRPS1L1P21108 318 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 MLF1P58340 268 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 RNF4P78317 190 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 OC90Q02509 493 aaPredicted RBP14.86□□□□□ -0.03
RAB40C-208ENST00000564703 TLR1Q15399 786 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 BEST3Q8N1M1 668 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 VWA5B2Q8N398 1253 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 ADCY4Q8NFM4 1077 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 OR7G1Q8NGA0 311 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 ZNF681Q96N22 645 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 RNF32Q9H0A6 362 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 ATAD3AQ9NVI7 634 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 CFL2Q9Y281 166 aa14.86□□□□□ -0.03
RAB40C-208ENST00000564703 YARS2Q9Y2Z4 477 aaKnown RBP14.86□□□□□ -0.03
RAB40C-208ENST00000564703 GOLGA8QA0A0J9YX86 632 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 GOLGA8OA6NCC3 632 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 OR6C76A6NM76 312 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 GABRR3A8MPY1 467 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 B8ZZF3 427 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 GOLGA8NF8WBI6 632 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 G6PDP11413 515 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 NCBP2P52298 156 aaKnown RBP eCLIP14.85□□□□□ -0.03
RAB40C-208ENST00000564703 FUT7Q11130 342 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 RPS6KA2Q15349 733 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 PRICKLE4Q2TBC4 344 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 FAM111BQ6SJ93 734 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 LARP4Q71RC2 724 aaKnown RBP eCLIP14.85□□□□□ -0.03
RAB40C-208ENST00000564703 SPATA19Q7Z5L4 167 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 NATD1Q8N6N6 113 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 RBMXL3Q8N7X1 1067 aaKnown RBP14.85□□□□□ -0.03
RAB40C-208ENST00000564703 ZNF321PQ8N8H1 164 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 ZFP28Q8NHY6 868 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 PNPLA2Q96AD5 504 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 OR10A5Q9H207 317 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 SLCO1B3Q9NPD5 702 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 ASIC5Q9NY37 505 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 MYOTQ9UBF9 498 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 ZNF223Q9UK11 482 aaPredicted RBP14.85□□□□□ -0.03
RAB40C-208ENST00000564703 USH1CQ9Y6N9 552 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 IGSF10Q6WRI0 2623 aa14.85□□□□□ -0.03
RAB40C-208ENST00000564703 TRAV17A0A0B4J275 112 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 C2orf92A0A1B0GVN3 265 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 OR5H15A6NDH6 313 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 MYO1GB0I1T2 1018 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 HRKO00198 91 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 WWP2O00308 870 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 SDHDO14521 159 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 PDPK1O15530 556 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 TBX19O60806 448 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 DIAPH2O60879 1101 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 ITGA10O75578 1167 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 SLITRK5O94991 958 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 TGDSO95455 350 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 F10P00742 488 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 IGKV3-11P04433 115 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 EPHA3P29320 983 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 SSTR4P31391 388 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 GPC1P35052 558 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 CYB561P49447 251 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 SSR4P51571 173 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 MANFP55145 182 aaKnown RBP14.84□□□□□ -0.03
RAB40C-208ENST00000564703 CLDN8P56748 225 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 SLC37A1P57057 533 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 PLEKHN1Q494U1 663 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-208ENST00000564703 NADK2Q4G0N4 442 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 TRMT12Q53H54 448 aaKnown RBP14.84□□□□□ -0.03
RAB40C-208ENST00000564703 CPTPQ5TA50 214 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 FAM47EQ6ZV65 393 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 ACAD11Q709F0 780 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 ZNF843Q8N446 348 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 CATSPER1Q8NEC5 780 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 CEP70Q8NHQ1 597 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 NUBPLQ8TB37 319 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 ERP27Q96DN0 273 aa14.84□□□□□ -0.03
RAB40C-208ENST00000564703 ZBED6CLQ96FA7 236 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-208ENST00000564703 ZNF764Q96H86 408 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-208ENST00000564703 GAL3ST4Q96RP7 486 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms