RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	INCA1	Q0VD86	236 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	HNRNPA0	Q13151	305 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	GPR33	Q49SQ1	333 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SPIC	Q8N5J4	248 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	TRPC4	Q9UBN4	977 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CTSF	Q9UBX1	484 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	PCDHGA5	Q9Y5G8	931 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MCRIP1	C9JLW8	97 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CXCL11	O14625	94 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	P2RX6	O15547	441 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MMP7	P09237	267 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MAGEA12	P43365	314 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SCAND1	P57086	179 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC5A8	Q8N695	610 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ATP6V1C2	Q8NEY4	427 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC2A12	Q8TD20	617 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	RRNAD1	Q96FB5	475 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	NTSR2	O95665	410 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	RHOQ	P17081	205 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	RPIA	P49247	311 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	GRIK4	Q16099	956 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CXorf57	Q6NSI4	855 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	DTWD1	Q8N5C7	304 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF433	Q8N7K0	673 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	NANP	Q8TBE9	248 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MZB1	Q8WU39	189 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	RNASEK-C17orf49	H0YIS7	233 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CLEC2L	P0C7M8	214 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ASPA	P45381	313 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	TSTA3	Q13630	321 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	OR52J3	Q8NH60	311 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	TCP10L2	B9ZVM9	353 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SERPIND1	P05546	499 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	GOT1	P17174	413 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	EPHX2	P34913	555 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC25A11	Q02978	314 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288		Q8N9G6	341 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	APH1B	Q8WW43	257 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MYLIP	Q8WY64	445 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	WDFY2	Q96P53	400 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF300	Q96RE9	604 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CCM2	Q9BSQ5	444 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	C20orf27	Q9GZN8	174 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	EMCN	Q9ULC0	261 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	C13orf42	A0A1B0GVH6	325 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	LOC730098	B7Z3J9	87 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	NME6	O75414	186 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ZBTB7A	O95365	584 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	LATS1	O95835	1130 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CD300LG	Q6UXG3	332 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SHKBP1	Q8TBC3	707 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CNIH3	Q8TBE1	160 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MAPK15	Q8TD08	544 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ATG5	Q9H1Y0	275 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288		A8MT66	165 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	IRAK2	O43187	625 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	FGF9	P31371	208 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	RNASE10	Q5GAN6	216 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	LRRC70	Q7Z2Q7	622 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	B3GNT7	Q8NFL0	401 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	JOSD2	Q8TAC2	188 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC5A11	Q8WWX8	675 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ARNTL2	Q8WYA1	636 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	FYTTD1	Q96QD9	318 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	TREX2	Q9BQ50	279 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	GPSM3	Q9Y4H4	160 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	AP4M1	O00189	453 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	UROD	P06132	367 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	TLX1	P31314	330 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ACSM3	Q53FZ2	586 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	PNLDC1	Q8NA58	520 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	FAM193B	Q96PV7	902 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	NXF2	Q9GZY0	626 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	LSM7	Q9UK45	103 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	IFNA2	P01563	188 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	OR5B17	Q8NGF7	314 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	GPR152	Q8TDT2	470 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	XAGE5	Q8WWM1	108 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ANKRD19P	Q9H560	264 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SOX17	Q9H6I2	414 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	GPR83	Q9NYM4	423 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CYTIP	O60759	359 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	TRAM2	Q15035	370 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	TBPL2	Q6SJ96	375 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SERPINA12	Q8IW75	414 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	FCRL2	Q96LA5	508 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	RPS6KB2	Q9UBS0	482 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	TP73	O15350	636 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	FMO6P	O60774	539 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	MB	P02144	154 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	HOXD4	P09016	255 aa	Predicted RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	GABRA5	P31644	462 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	PRSS3	P35030	304 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CDH11	P55287	796 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF460	Q14592	562 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC27A4	Q6P1M0	643 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	GAR1	Q9NY12	217 aa	Known RBP	4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC22A23	A1A5C7	686 aa		4.07	□□□□□ -1.76
MACF1-231	ENST00000564288	CIDEA	O60543	219 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms