RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 TGM6O95932 706 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 KRT14P02533 472 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 THBDP07204 575 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 THBS1P07996 1170 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 CPN1P15169 458 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 CXCR5P32302 372 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 MC3RP41968 323 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 CASP3P42574 277 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 GFRA1P56159 465 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 DOC2AQ14183 400 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 EFTUD2Q15029 972 aaKnown RBP eCLIP9.41□□□□□ -0.91e-9■■■■□ 19.6
SF3B3-204ENST00000563739 RPS6KA2Q15349 733 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 TSNQ15631 228 aaKnown RBP9.41□□□□□ -0.9
SF3B3-204ENST00000563739 TEDDM1Q5T9Z0 273 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 C18orf63Q68DL7 685 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 TRIM40Q6P9F5 258 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 GSTA5Q7RTV2 222 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 ZNF550Q7Z398 422 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 YRDCQ86U90 279 aaKnown RBP9.41□□□□□ -0.9
SF3B3-204ENST00000563739 PALM2Q8IXS6 379 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 CCT6BQ92526 530 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 HGDQ93099 445 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 ABTB1Q969K4 478 aaPredicted RBP9.41□□□□□ -0.9
SF3B3-204ENST00000563739 ADIPOR1Q96A54 375 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 ESAMQ96AP7 390 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 INTS12Q96CB8 462 aaKnown RBP9.41□□□□□ -0.9
SF3B3-204ENST00000563739 TMEM41AQ96HV5 264 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 GAL3ST4Q96RP7 486 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 TEX10Q9NXF1 929 aaPredicted RBP9.41□□□□□ -0.9
SF3B3-204ENST00000563739 HEY2Q9UBP5 337 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 MAD1L1Q9Y6D9 718 aa9.41□□□□□ -0.9
SF3B3-204ENST00000563739 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.4□□□□□ -0.99e-9■■■■■ 29.7
SF3B3-204ENST00000563739 C17orf51A8MQB3 221 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 GNB5O14775 395 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 SNPHO15079 494 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 SH3BGRLO75368 114 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 ERN1O75460 977 aaKnown RBP9.4□□□□□ -0.9
SF3B3-204ENST00000563739 F12P00748 615 aaPredicted RBP9.4□□□□□ -0.9
SF3B3-204ENST00000563739 PLAUP00749 431 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 CGAP01215 116 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 PGAM1P18669 254 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 GNAZP19086 355 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 TNNI3P19429 210 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 HIST1H1TP22492 207 aaPredicted RBP9.4□□□□□ -0.9
SF3B3-204ENST00000563739 GSTM2P28161 218 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 SSTR4P31391 388 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 GMPRP36959 345 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 PCYT1AP49585 367 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 LHX2P50458 406 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 CLDN15P56746 228 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 GNG11P61952 73 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 KRTAP24-1Q3LI83 254 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 RNASEH2BQ5TBB1 312 aaKnown RBP9.4□□□□□ -0.9
SF3B3-204ENST00000563739 MRM1Q6IN84 353 aaKnown RBP9.4□□□□□ -0.9
SF3B3-204ENST00000563739 HEPHL1Q6MZM0 1159 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 DNM1P46Q6ZS02 220 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 PRR22Q8IZ63 422 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 ZNF615Q8N8J6 731 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 TTLQ8NG68 377 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 DIO2Q92813 273 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 STARD4Q96DR4 205 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 NODALQ96S42 347 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 OSBPL9Q96SU4 736 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 OR2B2Q9GZK3 357 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 EHD1Q9H4M9 534 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 COPS7AQ9UBW8 275 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 SNX12Q9UMY4 172 aa9.4□□□□□ -0.9
SF3B3-204ENST00000563739 TENM1Q9UKZ4 2725 aa9.4□□□□□ -0.91
SF3B3-204ENST00000563739 A0A096LNT2 108 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 LRRC14BA6NHZ5 514 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 PGRMC1O00264 195 aaKnown RBP9.39□□□□□ -0.91
SF3B3-204ENST00000563739 KLF4O43474 513 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 TMPRSS11DO60235 418 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 TRAPPC6AO75865 159 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 ALOX15P16050 662 aaPredicted RBP9.39□□□□□ -0.91
SF3B3-204ENST00000563739 SERPINB3P29508 390 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 GGT5P36269 586 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 CPOXP36551 454 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 KCNC1P48547 511 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 STARP49675 285 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 CLDN18P56856 261 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 TAS2R39P59534 338 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 TNFRSF17Q02223 184 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 FUT7Q11130 342 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 TBL3Q12788 808 aaKnown RBP9.39□□□□□ -0.91
SF3B3-204ENST00000563739 GUSBP1Q15486 140 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 TBCELQ5QJ74 424 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 TIGD3Q6B0B8 471 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 FAM45BPQ6NSW5 357 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 HMBOX1Q6NT76 420 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 C20orf204Q6ZNR8 217 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 DND1Q8IYX4 353 aaKnown RBP9.39□□□□□ -0.91
SF3B3-204ENST00000563739 GPATCH11Q8N954 259 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 FAM45AQ8TCE6 357 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 MAIP1Q8WWC4 291 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 WNT2BQ93097 391 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 CERS2Q96G23 380 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 PBKQ96KB5 322 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 ZFP3Q96NJ6 502 aa9.39□□□□□ -0.91
SF3B3-204ENST00000563739 DGAT2Q96PD7 388 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms