RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 HNRNPH2P55795 449 aaKnown RBP17.1■□□□□ 0.33
NME3-204ENST00000563498 RAB10P61026 200 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 GRHL2Q6ISB3 625 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 WFDC11Q8NEX6 87 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 HUS1BQ8NHY5 278 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 MBD3L2Q8NHZ7 208 aaPredicted RBP17.1■□□□□ 0.33
NME3-204ENST00000563498 RBBP8Q99708 897 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 ANGPTL4Q9BY76 406 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 SNX15Q9NRS6 342 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 JKAMPQ9P055 326 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 OPTCQ9UBM4 332 aa17.1■□□□□ 0.33
NME3-204ENST00000563498 C2orf92A0A1B0GVN3 265 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 PRKRAO75569 313 aaKnown RBP17.09■□□□□ 0.33
NME3-204ENST00000563498 TRAPPC6AO75865 159 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 SLC35E2BP0CK96 405 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 SLC35E2P0CK97 266 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 CTSSP25774 331 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 HOXC12P31275 282 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 TMED10P49755 219 aaKnown RBP17.09■□□□□ 0.33
NME3-204ENST00000563498 LTBQ06643 244 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 FNDC7Q5VTL7 733 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 MRM1Q6IN84 353 aaKnown RBP17.09■□□□□ 0.33
NME3-204ENST00000563498 CYS1Q717R9 158 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 PACS2Q86VP3 889 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 SPPL2AQ8TCT8 520 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 EXT2Q93063 718 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 C18orf12Q96KH6 178 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 RILPQ96NA2 401 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 ZNF717Q9BY31 904 aaPredicted RBP17.09■□□□□ 0.33
NME3-204ENST00000563498 CALHM2Q9HA72 323 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 LYARQ9NX58 379 aaKnown RBP17.09■□□□□ 0.33
NME3-204ENST00000563498 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 ASB4Q9Y574 426 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 NINQ8N4C6 2090 aa17.09■□□□□ 0.33
NME3-204ENST00000563498 CXorf49A8MYA2 514 aaPredicted RBP17.08■□□□□ 0.32
NME3-204ENST00000563498 ACSL3O95573 720 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 NR2F6P10588 404 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 EPB42P16452 691 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 PTX3P26022 381 aaPredicted RBP17.08■□□□□ 0.32
NME3-204ENST00000563498 GP5P40197 560 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 FBXW4P57775 412 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 RPP38P78345 283 aaKnown RBP17.08■□□□□ 0.32
NME3-204ENST00000563498 DDX39BQ13838 428 aaKnown RBP17.08■□□□□ 0.32
NME3-204ENST00000563498 ISCA2Q86U28 154 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 DOK4Q8TEW6 326 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 PYROXD1Q8WU10 500 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 NTNG2Q96CW9 530 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 UGT2B28Q9BY64 529 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 TRIM31Q9BZY9 425 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 EPB41L4BQ9H329 900 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 ALG9Q9H6U8 611 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 WDR41Q9HAD4 459 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 NEUROD4Q9HD90 331 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 CAMK2AQ9UQM7 478 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 PCDHGA11Q9Y5H2 935 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 NPFFR2Q9Y5X5 522 aa17.08■□□□□ 0.32
NME3-204ENST00000563498 A0A0A6YYD5 115 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 A0A1W2PR48 441 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 CLCA1A8K7I4 914 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 EFCAB8A8MWE9 144 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 ZSCAN12O43309 604 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 KERAO60938 352 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 CDH16O75309 829 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 BMP7P18075 431 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 SSTR1P30872 391 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 MASP1P48740 699 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 LIPJQ5W064 366 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 BICRALQ6AI39 1079 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 TMEM64Q6YI46 380 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 CAPN12Q6ZSI9 719 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 RNF175Q8N4F7 328 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 C17orf47Q8NEP4 570 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 LINC01560Q8TB33 94 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 ZPLD1Q8TCW7 415 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 WDYHV1Q96HA8 205 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 TMEM41AQ96HV5 264 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 GNRHR2Q96P88 292 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 TRIB1Q96RU8 372 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 ATOH8Q96SQ7 321 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 MTERF1Q99551 399 aaKnown RBP17.07■□□□□ 0.32
NME3-204ENST00000563498 DDX31Q9H8H2 851 aaKnown RBP17.07■□□□□ 0.32
NME3-204ENST00000563498 CXorf21Q9HAI6 301 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 NMRAL1Q9HBL8 299 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 BEX4Q9NWD9 120 aaPredicted RBP17.07■□□□□ 0.32
NME3-204ENST00000563498 TEX10Q9NXF1 929 aaPredicted RBP17.07■□□□□ 0.32
NME3-204ENST00000563498 FETUBQ9UGM5 382 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 SLC6A5Q9Y345 797 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 VPS13CQ709C8 3753 aa17.07■□□□□ 0.32
NME3-204ENST00000563498 FREM3P0C091 2139 aa17.06■□□□□ 0.32
NME3-204ENST00000563498 NSD1Q96L73 2696 aaPredicted RBP17.06■□□□□ 0.32
NME3-204ENST00000563498 TCRBV9S1A1TA0A576 114 aa17.06■□□□□ 0.32
NME3-204ENST00000563498 WASHC1A8K0Z3 465 aa17.06■□□□□ 0.32
NME3-204ENST00000563498 SUPT3HB4E1H0 165 aa17.06■□□□□ 0.32
NME3-204ENST00000563498 EEF1E1-BLOC1S5C9J1V9 151 aa17.06■□□□□ 0.32
NME3-204ENST00000563498 H0YIV9 168 aa17.06■□□□□ 0.32
NME3-204ENST00000563498 CCDC188H7C350 402 aa17.06■□□□□ 0.32
NME3-204ENST00000563498 EEF1E1O43324 174 aaKnown RBP17.06■□□□□ 0.32
NME3-204ENST00000563498 TMPRSS11DO60235 418 aa17.06■□□□□ 0.32
NME3-204ENST00000563498 SUPT3HO75486 399 aa17.06■□□□□ 0.32
NME3-204ENST00000563498 EEDO75530 441 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms