RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 LRRC25Q8N386 305 aaPredicted RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 IL22RA1Q8N6P7 574 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 OR4K14Q8NGD5 310 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 MAPKAP1Q9BPZ7 522 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 TACO1Q9BSH4 297 aaKnown RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 BDH2Q9BUT1 245 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 ASPSCR1Q9BZE9 553 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 CHST8Q9H2A9 424 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 CXorf36Q9H7Y0 433 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 CAAP1Q9H8G2 361 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 SYNPO2LQ9H987 977 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 FAM60AQ9NP50 221 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 DCAF13Q9NV06 445 aaKnown RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 IRAK4Q9NWZ3 460 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 ADPRHL2Q9NX46 363 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 CES1P1Q9UKY3 287 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 CNOT11Q9UKZ1 510 aaKnown RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 RAB23Q9ULC3 237 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 CLCA2Q9UQC9 943 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 ANGPT4Q9Y264 503 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 C15orf41Q9Y2V0 281 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 NAALAD2Q9Y3Q0 740 aa9.14□□□□□ -0.95
UBFD1-202ENST00000563366 GOLGA4Q13439 2230 aaKnown RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 NUP214P35658 2090 aaPredicted RBP9.14□□□□□ -0.95
UBFD1-202ENST00000563366 EME2A4GXA9 379 aaPredicted RBP9.13□□□□□ -0.95
UBFD1-202ENST00000563366 FITM1A5D6W6 292 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 SYNDIG1LA6NDD5 238 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 SHISA8B8ZZ34 492 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 H0YIG0 161 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 H0YJX3 145 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 PDE9AO76083 593 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 AGR2O95994 175 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 ANKRD34CP0C6C1 535 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF883P0CG24 379 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 RNH1P13489 461 aaKnown RBP9.13□□□□□ -0.95
UBFD1-202ENST00000563366 ACADSP16219 412 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 EFNA1P20827 205 aaPredicted RBP9.13□□□□□ -0.95
UBFD1-202ENST00000563366 AVPR2P30518 371 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 CCT3P49368 545 aaKnown RBP9.13□□□□□ -0.95
UBFD1-202ENST00000563366 KHKP50053 298 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 GFERP55789 205 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 RAB38P57729 211 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 OR1D5P58170 312 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 DSTNP60981 165 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 BIKQ13323 160 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 SLC14A1Q13336 389 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 TP53BP2Q13625 1128 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 ANGPT1Q15389 498 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 GRAMD1BQ3KR37 738 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 TRIM61Q5EBN2 209 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.13□□□□□ -0.95
UBFD1-202ENST00000563366 C18orf63Q68DL7 685 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 USP53Q70EK8 1073 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 PATL1Q86TB9 770 aaKnown RBP9.13□□□□□ -0.95
UBFD1-202ENST00000563366 GPR135Q8IZ08 494 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 MMP21Q8N119 569 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 PACRGLQ8N7B6 248 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 AMER3Q8N944 861 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 ICA1LQ8NDH6 482 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 PNPT1Q8TCS8 783 aaKnown RBP9.13□□□□□ -0.95
UBFD1-202ENST00000563366 RASSF5Q8WWW0 418 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 DNAJC9Q8WXX5 260 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 LZICQ8WZA0 190 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 EME1Q96AY2 570 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 SLC47A1Q96FL8 570 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 SLC35G5Q96KT7 338 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 GLIPR2Q9H4G4 154 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 ZNF768Q9H5H4 540 aaKnown RBP9.13□□□□□ -0.95
UBFD1-202ENST00000563366 SLAMF7Q9NQ25 335 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 AGPAT4Q9NRZ5 378 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 ZCCHC3Q9NUD5 404 aaKnown RBP9.13□□□□□ -0.95
UBFD1-202ENST00000563366 KCMF1Q9P0J7 381 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 BAG5Q9UL15 447 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 CDC14AQ9UNH5 594 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 DTNAQ9Y4J8 743 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 SCN3AQ9NY46 2000 aa9.13□□□□□ -0.95
UBFD1-202ENST00000563366 COL5A1P20908 1838 aaPredicted RBP9.12□□□□□ -0.95
UBFD1-202ENST00000563366 IGHV5-51A0A0C4DH38 117 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 HYKKA2RU49 373 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 GLOD5A6NK44 160 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 C5orf58C9J3I9 102 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 CLDN4O14493 209 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 PGRMC2O15173 223 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 EMC8O43402 210 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 ASNA1O43681 348 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 OR2B3O76000 313 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SOX30O94993 753 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 CPNE6O95741 557 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SERPINA1P01009 418 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 LDLRP01130 860 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 PORP16435 677 aaPredicted RBP9.12□□□□□ -0.95
UBFD1-202ENST00000563366 EPHA1P21709 976 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 CD1CP29017 333 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 KDELR2P33947 212 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 GABRA4P48169 554 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 MVDP53602 400 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 ARSFP54793 590 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 CDK6Q00534 326 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 SCARB2Q14108 478 aa9.12□□□□□ -0.95
UBFD1-202ENST00000563366 TAF11Q15544 211 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms