RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 RPL21P46778 160 aaKnown RBP10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 PIK3CGP48736 1102 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 CDK9P50750 372 aaKnown RBP10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 RAP1GDS1P52306 607 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 CDKL1Q00532 357 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 TNFRSF17Q02223 184 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 TGM3Q08188 693 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 RCN2Q14257 317 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 NTRK2Q16620 822 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 KBTBD12Q3ZCT8 623 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 FBXL19-AS1Q494R0 122 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 OR4C11Q6IEV9 310 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 ANGPTL8Q6UXH0 198 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 ZNF550Q7Z398 422 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 YTHDF3Q7Z739 585 aaKnown RBP10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 KIF18BQ86Y91 864 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 KLHL7Q8IXQ5 586 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 BBOF1Q8ND07 529 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 SIMC1Q8NDZ2 872 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 FAM83FQ8NEG4 500 aaPredicted RBP10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 RIT1Q92963 219 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 ABTB1Q969K4 478 aaPredicted RBP10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 PIK3IP1Q96FE7 263 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 COX4I2Q96KJ9 171 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 TBCDQ9BTW9 1192 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 PRDM14Q9GZV8 571 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 NT5DC2Q9H857 520 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 SERHLQ9NQF3 203 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 CNIH4Q9P003 139 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 C15orf41Q9Y2V0 281 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 TEX264Q9Y6I9 313 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 SPACA6W5XKT8 324 aa10.66□□□□□ -0.7
NSMCE1-202ENST00000561960 C2orf92A0A1B0GVN3 265 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 SUPT3HB4E1H0 165 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 H0Y3Z8 333 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 PLPP1O14494 284 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 TMPRSS11DO60235 418 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 ERN1O75460 977 aaKnown RBP10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 SUPT3HO75486 399 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 SMNDC1O75940 238 aaKnown RBP eCLIP10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 CDC25BP30305 580 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 RPS13P62277 151 aaKnown RBP10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 IGLV3-21P80748 117 aaPredicted RBP10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 MGAT5Q09328 741 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 KHDRBS2Q5VWX1 349 aaKnown RBP10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 STEAP4Q687X5 459 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 VASNQ6EMK4 673 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 FAM180BQ6P0A1 224 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 GPR180Q86V85 440 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 FBXO36Q8NEA4 188 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 OR7G3Q8NG95 312 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 GRK7Q8WTQ7 553 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 VPS39Q96JC1 886 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 HS3ST6Q96QI5 342 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 UBQLN3Q9H347 655 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 ALG9Q9H6U8 611 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 BEX4Q9NWD9 120 aaPredicted RBP10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 CORO1CQ9ULV4 474 aaPredicted RBP10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 RNF112Q9ULX5 631 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 PPP2R2CQ9Y2T4 447 aa10.65□□□□□ -0.7
NSMCE1-202ENST00000561960 A0A1W2PR48 441 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 MBD3L4A6NDZ8 208 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 MBD3L3A6NE82 208 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 MBD3L5A6NJ08 208 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 UBXN8O00124 270 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 PGRMC2O15173 223 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 DYRK3O43781 588 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 AIFM1O95831 613 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 S100BP04271 92 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 HPNP05981 417 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 CYP4B1P13584 511 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 CD1DP15813 335 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 IVDP26440 423 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 CASP3P42574 277 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 NEK2P51955 445 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 SLC12A2P55011 1212 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 SIRPAP78324 504 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 FAM27E3Q08E93 113 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 PDIA2Q13087 525 aaKnown RBP10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 CBLBQ13191 982 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 EXOSC7Q15024 291 aaKnown RBP10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 RPS6KA2Q15349 733 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 HIST2H2ACQ16777 129 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 ANKRD34AQ69YU3 496 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 HIST2H2AA3Q6FI13 130 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 OR5M10Q6IEU7 315 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 MED27Q6P2C8 311 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 CXXC5Q7LFL8 322 aaKnown RBP10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 GALNT7Q86SF2 657 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 PACS2Q86VP3 889 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 PDIK1LQ8N165 341 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 SLC35F6Q8N357 371 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 HUS1BQ8NHY5 278 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 MBD3L2Q8NHZ7 208 aaPredicted RBP10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 SPPL2AQ8TCT8 520 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 PBKQ96KB5 322 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 NODALQ96S42 347 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 OSBPL9Q96SU4 736 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 CCL19Q99731 98 aa10.64□□□□□ -0.71
NSMCE1-202ENST00000561960 G6PC3Q9BUM1 346 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms