RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SLC22A2O15244 555 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 SCO2O43819 266 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 SLC16A8O95907 504 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 ERVK-10P10266 1014 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 SLC2A2P11168 524 aaPredicted RBP3.3□□□□□ -1.88
HERC1-215ENST00000561436 CD27P26842 260 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 CHRNB4P30926 498 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 YWHABP31946 246 aaKnown RBP3.3□□□□□ -1.88
HERC1-215ENST00000561436 HNF4AP41235 474 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 CLDN17P56750 224 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 EVCP57679 992 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 ARF5P84085 180 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 P2RY6Q15077 328 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 PPA1Q15181 289 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 PSMD5Q16401 504 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 XKR6Q5GH73 641 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 XKR4Q5GH76 650 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 PRSS55Q6UWB4 352 aaPredicted RBP3.3□□□□□ -1.88
HERC1-215ENST00000561436 BTNL8Q6UX41 500 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 GBP7Q8N8V2 638 aaPredicted RBP3.3□□□□□ -1.88
HERC1-215ENST00000561436 TMEM178AQ8NBL3 297 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 RNF149Q8NC42 400 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 KIAA0895Q8NCT3 520 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 ITFG1Q8TB96 612 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 HPSE2Q8WWQ2 592 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 PIBF1Q8WXW3 757 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 PIK3R3Q92569 461 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 ZNF524Q96C55 264 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 CDKN2AIPNLQ96HQ2 116 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 RPP25Q9BUL9 199 aaKnown RBP3.3□□□□□ -1.88
HERC1-215ENST00000561436 SLC5A7Q9GZV3 580 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 ZNF350Q9GZX5 532 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 AKIRIN1Q9H9L7 192 aaPredicted RBP3.3□□□□□ -1.88
HERC1-215ENST00000561436 RNPEPL1Q9HAU8 725 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 GPR132Q9UNW8 380 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 SELENOKQ9Y6D0 94 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.3□□□□□ -1.88
HERC1-215ENST00000561436 COLEC10Q9Y6Z7 277 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 AK9Q5TCS8 1911 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 BDP1A6H8Y1 2624 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 NAV1Q8NEY1 1877 aa3.3□□□□□ -1.88
HERC1-215ENST00000561436 PLXNA1Q9UIW2 1896 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 C2orf92A0A1B0GVN3 265 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 TRIM64A6NGJ6 449 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 TRIM64BA6NI03 449 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 SHISA7A6NL88 538 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 PRSS46E5RG02 174 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 E9PAM4 449 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 PRRG1O14668 218 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 TRDMT1O14717 391 aaKnown RBP3.29□□□□□ -1.88
HERC1-215ENST00000561436 GRAP2O75791 330 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 B3GAT3O94766 335 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 NGFP01138 241 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 ATP1B1P05026 303 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 FAM157CP0CG43 387 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 PRSS56P0CW18 603 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 UROSP10746 265 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 HLA-DPA1P20036 260 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 FCARP24071 287 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 ELAVL4P26378 380 aaKnown RBP3.29□□□□□ -1.88
HERC1-215ENST00000561436 OR1D2P34982 312 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 ARL2P36404 184 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 KCNJ1P48048 391 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 KHKP50053 298 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
HERC1-215ENST00000561436 GCNT1Q02742 428 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 DRP2Q13474 957 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 EMC2Q15006 297 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 ACKR1Q16570 336 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 MAPK6Q16659 721 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 KYAT1Q16773 422 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 SGSM1Q2NKQ1 1148 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 DCAF4L1Q3SXM0 396 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 ZNF876PQ49A33 203 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 SLC25A53Q5H9E4 307 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 ARMCX4Q5H9R4 360 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 FAM78AQ5JUQ0 283 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 TMEM207Q6UWW9 146 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 KCTD9Q7L273 389 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 ITIH5Q86UX2 942 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 CCDC83Q8IWF9 413 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 ZBTB8OSQ8IWT0 167 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 OR4C3Q8NH37 302 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 C2orf15Q8WU43 125 aaKnown RBP3.29□□□□□ -1.88
HERC1-215ENST00000561436 PTP4A1Q93096 173 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 AP2M1Q96CW1 435 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 SNRNP40Q96DI7 357 aaKnown RBP3.29□□□□□ -1.88
HERC1-215ENST00000561436 CFAP36Q96G28 342 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 DUX3Q96PT4 197 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 HSD17B14Q9BPX1 270 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 CCDC3Q9BQI4 270 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 PI4K2AQ9BTU6 479 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 CUEDC2Q9H467 287 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 KCNMB3Q9NPA1 279 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 HEBP1Q9NRV9 189 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 GPR173Q9NS66 373 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 IARS2Q9NSE4 1012 aaKnown RBP3.29□□□□□ -1.88
HERC1-215ENST00000561436 C2orf42Q9NWW7 574 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 EPHA6Q9UF33 1036 aa3.29□□□□□ -1.88
HERC1-215ENST00000561436 NOCTQ9UK39 431 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms