RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	GLOD5	A6NK44	160 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	SUV39H1	O43463	412 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	DUX1	O43812	170 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	B3GALT2	O43825	422 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	KIF1C	O43896	1103 aa	Known RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	PRKRA	O75569	313 aa	Known RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	CREG1	O75629	220 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	KRT75	O95678	551 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	CTSB	P07858	339 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	UMPS	P11172	480 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	CKMT2	P17540	419 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	ACP1	P24666	158 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	ALDH4A1	P30038	563 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	NTS	P30990	170 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	SOAT1	P35610	550 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	CHI3L1	P36222	383 aa	Predicted RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	BUD31	P41223	144 aa	Predicted RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	GABRA4	P48169	554 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	MVD	P53602	400 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	MANF	P55145	182 aa	Known RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	OR1D5	P58170	312 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	GPLD1	P80108	840 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	TNFRSF17	Q02223	184 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	FADD	Q13158	208 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	RGN	Q15493	299 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	ADRM1	Q16186	407 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	VMAC	Q2NL98	169 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	PRTG	Q2VWP7	1150 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	DEFB110	Q30KQ9	67 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	DEFB134	Q4QY38	66 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	OGFRL1	Q5TC84	451 aa	Predicted RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	NKAIN2	Q5VXU1	208 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	SAXO2	Q658L1	398 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	C18orf63	Q68DL7	685 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	ZCCHC8	Q6NZY4	707 aa	Known RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	FAM180B	Q6P0A1	224 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	SLC48A1	Q6P1K1	146 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	ERICH5	Q6P6B1	374 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	CCDC81	Q6ZN84	652 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	PTOV1	Q86YD1	416 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	PDSS2	Q86YH6	399 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	TMEM126B	Q8IUX1	230 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	MCAT	Q8IVS2	390 aa	Known RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	PAPD5	Q8NDF8	572 aa	Known RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	OR52N2	Q8NGI0	321 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	OR4C6	Q8NH72	309 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	OR5AK3P	Q8NH89	298 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	FAM110B	Q8TC76	370 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	PNPT1	Q8TCS8	783 aa	Known RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	CANT1	Q8WVQ1	401 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	NCSTN	Q92542	709 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	UCN3	Q969E3	161 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	NCLN	Q969V3	563 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	FAM162A	Q96A26	154 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	NEURL3	Q96EH8	262 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	ZNF285	Q96NJ3	590 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	AMDHD1	Q96NU7	426 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	DEPDC7	Q96QD5	511 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	PKP2	Q99959	881 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	TACO1	Q9BSH4	297 aa	Known RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	EFHD1	Q9BUP0	239 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	DUSP23	Q9BVJ7	150 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	GLIPR2	Q9H4G4	154 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	RAD21L1	Q9H4I0	556 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	EPS8L2	Q9H6S3	715 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	LYRM4	Q9HD34	91 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	PRDM9	Q9NQV7	894 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	STARD5	Q9NSY2	213 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	SIRT3	Q9NTG7	399 aa	Predicted RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	CCM2L	Q9NUG4	571 aa	Predicted RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	OLAH	Q9NV23	265 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	GPATCH2	Q9NW75	528 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	KCMF1	Q9P0J7	381 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	SEMA5B	Q9P283	1151 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	ANAPC2	Q9UJX6	822 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	UTS2R	Q9UKP6	389 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	ACSL6	Q9UKU0	697 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	PADI4	Q9UM07	663 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	ENTPD4	Q9Y227	616 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	MRPS2	Q9Y399	296 aa	Known RBP	7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	SLC22A7	Q9Y694	548 aa		7.08	□□□□□ -1.28
TPM1-231	ENST00000561395	IGHV5-51	A0A0C4DH38	117 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	LY6G6E	A0A0G2JKS1	128 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	ZNF860	A6NHJ4	632 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	MYO1G	B0I1T2	1018 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	TXNDC9	O14530	226 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	SRPX2	O60687	465 aa	Predicted RBP	7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	GALR3	O60755	368 aa	Predicted RBP	7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	TNFRSF21	O75509	655 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	TIPRL	O75663	272 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	ZBTB11	O95625	1053 aa	Predicted RBP	7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	C9	P02748	559 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	ETFA	P13804	333 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	PNLIP	P16233	465 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	IL10	P22301	178 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	CPN2	P22792	545 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	PEX2	P28328	305 aa		7.07	□□□□□ -1.28
TPM1-231	ENST00000561395	CSF2RB	P32927	897 aa		7.07	□□□□□ -1.28

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