RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 RPA1P27694 616 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 ID1P41134 155 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 SLC6A8P48029 635 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 SLC1A6P48664 564 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 NDST1P52848 882 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 NDUFV3P56181 108 aaKnown RBP4.54□□□□□ -1.68
MARK3-220ENST00000560417 PEX3P56589 373 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 ERVK11-1P61568 191 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 SRPXP78539 464 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 KRTAP1-1Q07627 177 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 ECSCRQ19T08 205 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 WDR25Q64LD2 544 aaPredicted RBP4.54□□□□□ -1.68
MARK3-220ENST00000560417 ZCCHC12Q6PEW1 402 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 RPAINQ86UA6 219 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 LRRC17Q8N6Y2 441 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 OR1K1Q8NGR3 316 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 OR1B1Q8NGR6 318 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 RDH11Q8TC12 318 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 C14orf79Q96F83 325 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 C16orf58Q96GQ5 468 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 ACCSQ96QU6 501 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 CCDC28BQ9BUN5 200 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 LRRC61Q9BV99 259 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 TUBB1Q9H4B7 451 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 MOB1AQ9H8S9 216 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 LHX3Q9UBR4 397 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 ATG4BQ9Y4P1 393 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 FHAD1B1AJZ9 1412 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 NUP160Q12769 1436 aa4.54□□□□□ -1.68
MARK3-220ENST00000560417 PCNX3Q9H6A9 2034 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 BCLAF3A2AJT9 711 aaKnown RBP4.53□□□□□ -1.68
MARK3-220ENST00000560417 TMCO5BA8MYB1 307 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 SH2D1BO14796 132 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 ADAM12O43184 909 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 SSX5O60225 188 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 STAM2O75886 525 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 MBL2P11226 248 aaPredicted RBP4.53□□□□□ -1.68
MARK3-220ENST00000560417 GNSP15586 552 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 PTPN4P29074 926 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 PPP2R1AP30153 589 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 ZNF131P52739 623 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 RPS4XP62701 263 aaKnown RBP4.53□□□□□ -1.68
MARK3-220ENST00000560417 CARTPTQ16568 116 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 CLPPQ16740 277 aaPredicted RBP4.53□□□□□ -1.68
MARK3-220ENST00000560417 HAGHQ16775 308 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 ZSWIM7Q19AV6 140 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 GLIPR1L2Q4G1C9 344 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 STEAP1BQ6NZ63 245 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 DOK6Q6PKX4 331 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 RBM43Q6ZSC3 357 aaKnown RBP4.53□□□□□ -1.68
MARK3-220ENST00000560417 NUFIP2Q7Z417 695 aaKnown RBP4.53□□□□□ -1.68
MARK3-220ENST00000560417 LINC00518Q8N0U6 118 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 RNF148Q8N7C7 305 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 ZNF781Q8N8C0 355 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 MINDY2Q8NBR6 621 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 MIPOL1Q8TD10 442 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 U2AF1L4Q8WU68 220 aaKnown RBP4.53□□□□□ -1.68
MARK3-220ENST00000560417 TAF15Q92804 592 aaKnown RBP eCLIP4.53□□□□□ -1.68
MARK3-220ENST00000560417 ZNF689Q96CS4 500 aaPredicted RBP4.53□□□□□ -1.68
MARK3-220ENST00000560417 IWS1Q96ST2 819 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 KCNK16Q96T55 309 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 TRIM51Q9BSJ1 452 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 OCR1Q9BZK8 76 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 STRADBQ9C0K7 418 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 VPS33BQ9H267 617 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 NT5DC2Q9H857 520 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 STARD5Q9NSY2 213 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 MIOXQ9UGB7 285 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 TUBGCP4Q9UGJ1 667 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 MUTYHQ9UIF7 546 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 HOOK1Q9UJC3 728 aaKnown RBP4.53□□□□□ -1.68
MARK3-220ENST00000560417 SPATA2Q9UM82 520 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 SLC6A5Q9Y345 797 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 CLCA3PQ9Y6N3 262 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 SNED1Q8TER0 1413 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 SHROOM2Q13796 1616 aa4.53□□□□□ -1.68
MARK3-220ENST00000560417 SALL1Q9NSC2 1324 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 CUL7Q14999 1698 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 TRGV8A0A0C4DH27 118 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 A0A1W2PPR1 153 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 RASGRF2O14827 1237 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 PDGFBP01127 241 aaPredicted RBP4.52□□□□□ -1.69
MARK3-220ENST00000560417 ZCCHC18P0CG32 403 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 PRDX6P30041 224 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 TRIM23P36406 574 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 ETV5P41161 510 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 ASMTP46597 345 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 NPY2RP49146 381 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 NUMBP49757 651 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 SIX1Q15475 284 aaPredicted RBP4.52□□□□□ -1.69
MARK3-220ENST00000560417 CCL14Q16627 93 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 AGKQ53H12 422 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 MUC21Q5SSG8 566 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 FAM182AQ5T1J6 154 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 ASRGL1Q7L266 308 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 AMZ2Q86W34 360 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 CCDC71Q8IV32 467 aaPredicted RBP4.52□□□□□ -1.69
MARK3-220ENST00000560417 ZNF440Q8IYI8 595 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 BANPQ8N9N5 519 aa4.52□□□□□ -1.69
MARK3-220ENST00000560417 NPRL2Q8WTW4 380 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms