RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 ZNF441Q8N8Z8 693 aa15.97■□□□□ 0.15
CRTC3-208ENST00000560098 FBXO25Q8TCJ0 367 aa15.97■□□□□ 0.15
CRTC3-208ENST00000560098 FOXC2Q99958 501 aa15.97■□□□□ 0.15
CRTC3-208ENST00000560098 POLDIP3Q9BY77 421 aaKnown RBP15.97■□□□□ 0.15
CRTC3-208ENST00000560098 IPPKQ9H8X2 491 aa15.97■□□□□ 0.15
CRTC3-208ENST00000560098 PSD3Q9NYI0 1048 aa15.97■□□□□ 0.15
CRTC3-208ENST00000560098 ITPR3Q14573 2671 aa15.97■□□□□ 0.15
CRTC3-208ENST00000560098 C15orf38-AP3S2A0A0A6YYH1 394 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 LRRC14BA6NHZ5 514 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 AHRRA9YTQ3 701 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 FOXE1O00358 373 aaPredicted RBP15.96■□□□□ 0.15
CRTC3-208ENST00000560098 TP53I11O14683 189 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 KRT38O76015 456 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 C2P06681 752 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 SSTR4P31391 388 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 UQCRC1P31930 480 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 C2orf54Q08AI8 447 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 GTF2H2Q13888 395 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 ACAP2Q15057 778 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 RPS6KA2Q15349 733 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 PCBP2Q15366 365 aaKnown RBP eCLIP15.96■□□□□ 0.15
CRTC3-208ENST00000560098 OR52E8Q6IFG1 317 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 GTF2H2CQ6P1K8 395 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 TMEM64Q6YI46 380 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 NUDT13Q86X67 352 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 RELL2Q8NC24 303 aaPredicted RBP15.96■□□□□ 0.15
CRTC3-208ENST00000560098 WDR20Q8TBZ3 569 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 UCN3Q969E3 161 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 TP53INP1Q96A56 240 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 GPATCH1Q9BRR8 931 aaKnown RBP15.96■□□□□ 0.15
CRTC3-208ENST00000560098 CXXC4Q9H2H0 198 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 SNX15Q9NRS6 342 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 CCM2LQ9NUG4 571 aaPredicted RBP15.96■□□□□ 0.15
CRTC3-208ENST00000560098 ZNF358Q9NW07 568 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 CRIM1Q9NZV1 1036 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 IKBKGQ9Y6K9 419 aa15.96■□□□□ 0.15
CRTC3-208ENST00000560098 DVL2O14641 736 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 SNX4O95219 450 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 EPPINO95925 133 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 GBAP04062 536 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 CD99P14209 185 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 BMP5P22003 454 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 PIK3CGP48736 1102 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 NEK2P51955 445 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 FBXW4P57775 412 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 ACSF3Q4G176 576 aaPredicted RBP15.95■□□□□ 0.14
CRTC3-208ENST00000560098 MROH9Q5TGP6 573 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 HLA-DQA1Q5Y7H0 255 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 GOLGA7Q7Z5G4 137 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 L3MBTL4Q8NA19 623 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 NAXEQ8NCW5 288 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 TNIP2Q8NFZ5 429 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 LRRC46Q96FV0 321 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 TIMP4Q99727 224 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 TMUB1Q9BVT8 246 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 RAB17Q9H0T7 212 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 CLEC4MQ9H2X3 399 aaPredicted RBP15.95■□□□□ 0.14
CRTC3-208ENST00000560098 CXorf21Q9HAI6 301 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 RASSF1Q9NS23 344 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 PYCARDQ9ULZ3 195 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 RNF11Q9Y3C5 154 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 TNPO3Q9Y5L0 923 aaKnown RBP15.95■□□□□ 0.14
CRTC3-208ENST00000560098 NPFFR2Q9Y5X5 522 aa15.95■□□□□ 0.14
CRTC3-208ENST00000560098 A0A1W2PS29 197 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 FAM221AA4D161 298 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 PGRMC2O15173 223 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 DIAPH2O60879 1101 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 TRAPPC6AO75865 159 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 KLHL2O95198 593 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 CEACAM8P31997 349 aaPredicted RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 TMED10P49755 219 aaKnown RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 ASCL1P50553 236 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 CRYZQ08257 329 aaKnown RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 TRADDQ15628 312 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 BICRALQ6AI39 1079 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 METTL2BQ6P1Q9 378 aaKnown RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 ZDHHC24Q6UX98 284 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 LACC1Q8IV20 430 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 GALNT12Q8IXK2 581 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 CHDHQ8NE62 594 aaPredicted RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 SPPL2AQ8TCT8 520 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 RILPQ96NA2 401 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 SECISBP2Q96T21 854 aaKnown RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 SH3GL2Q99962 352 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 ANGPTL4Q9BY76 406 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 ZNF629Q9UEG4 869 aaPredicted RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 ST6GALNAC2Q9UJ37 374 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 ZNF469Q96JG9 3925 aaPredicted RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 NCKAP5O14513 1909 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 A0A096LPK6 155 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 HMX2A2RU54 273 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 SEMA3DO95025 777 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 SIX3O95343 332 aaPredicted RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 CLDN9O95484 217 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 HPNP05981 417 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 PIK3R1P27986 724 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 TIMP3P35625 211 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 MASP1P48740 699 aa15.94■□□□□ 0.14
CRTC3-208ENST00000560098 CDK9P50750 372 aaKnown RBP15.94■□□□□ 0.14
CRTC3-208ENST00000560098 WNT3P56703 355 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms