RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 NAV3Q8IVL0 2385 aa8.42□□□□□ -1.06
HDDC3-204ENST00000559834 DCHS2Q6V1P9 2916 aa8.42□□□□□ -1.06
HDDC3-204ENST00000559834 CSMD2Q7Z408 3487 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 AKAP6Q13023 2319 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 MPDZO75970 2070 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 TCRBV9S1A1TA0A576 114 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 CCDC189A1A4V9 331 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 FAM159BA6NKW6 160 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 HRKO00198 91 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 PLPP1O14494 284 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 UGDHO60701 494 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 KERAO60938 352 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 ACSL3O95573 720 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 RAF1P04049 648 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 FAM58BPP0C7Q3 252 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 NR2F6P10588 404 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 KRT15P19012 456 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 CTSSP25774 331 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 PIK3R1P27986 724 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 OPRM1P35372 400 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 CDK9P50750 372 aaKnown RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 HNRNPH2P55795 449 aaKnown RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 CRYZQ08257 329 aaKnown RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 FOXD4Q12950 439 aaPredicted RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 CUL3Q13618 768 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 KEAP1Q14145 624 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 SETDB1Q15047 1291 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 EBPQ15125 230 aaKnown RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 RPS6KA2Q15349 733 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 TOMM20Q15388 145 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 ACSF3Q4G176 576 aaPredicted RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 C6orf163Q5TEZ5 329 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 NSUN5P2Q63ZY6 315 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 CCDC91Q7Z6B0 441 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 TEX9Q8N6V9 391 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 RELL2Q8NC24 303 aaPredicted RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 SPPL2AQ8TCT8 520 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 DOK4Q8TEW6 326 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 UBTD2Q8WUN7 234 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 MTERF1Q99551 399 aaKnown RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 SORBS1Q9BX66 1292 aaKnown RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 ANGPTL4Q9BY76 406 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 EPB41L4BQ9H329 900 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 DDX31Q9H8H2 851 aaKnown RBP8.41□□□□□ -1.06
HDDC3-204ENST00000559834 ACTR8Q9H981 624 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 CALHM2Q9HA72 323 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 DMRT3Q9NQL9 472 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 WHRNQ9P202 907 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 CBLCQ9ULV8 474 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 ACOT9Q9Y305 439 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 ASB4Q9Y574 426 aa8.41□□□□□ -1.06
HDDC3-204ENST00000559834 A0A1W2PR48 441 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 FAM187AA6NFU0 413 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 CD8B2A6NJW9 211 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 GLOD5A6NK44 160 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 H0YIV9 168 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 UBXN8O00124 270 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 FOXE1O00358 373 aaPredicted RBP8.4□□□□□ -1.06
HDDC3-204ENST00000559834 IL18BPO95998 194 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 HPNP05981 417 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 DRD2P14416 443 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 HOXB4P17483 251 aaPredicted RBP8.4□□□□□ -1.06
HDDC3-204ENST00000559834 TACR1P25103 407 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 PIK3CGP48736 1102 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 FBXW4P57775 412 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 GNG11P61952 73 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 RPS13P62277 151 aaKnown RBP8.4□□□□□ -1.06
HDDC3-204ENST00000559834 EEF1A1P68104 462 aaKnown RBP8.4□□□□□ -1.06
HDDC3-204ENST00000559834 ADAM8P78325 824 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 SORDQ00796 357 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 RCAN2Q14206 197 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 FAM83EQ2M2I3 478 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 NHSL2Q5HYW2 709 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 EEF1A1P5Q5VTE0 462 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 VASNQ6EMK4 673 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 MRM1Q6IN84 353 aaKnown RBP8.4□□□□□ -1.06
HDDC3-204ENST00000559834 GALNT12Q8IXK2 581 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 PPM1NQ8N819 430 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 NAXEQ8NCW5 288 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 OR7G1Q8NGA0 311 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 OR4K14Q8NGD5 310 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 RHEBL1Q8TAI7 183 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 ABTB1Q969K4 478 aaPredicted RBP8.4□□□□□ -1.06
HDDC3-204ENST00000559834 RILPQ96NA2 401 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 GNRHR2Q96P88 292 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 TRIB1Q96RU8 372 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 ATOH8Q96SQ7 321 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 NAPGQ99747 312 aaPredicted RBP8.4□□□□□ -1.06
HDDC3-204ENST00000559834 ERP44Q9BS26 406 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 YIPF4Q9BSR8 244 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 PRDM14Q9GZV8 571 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 NEUROD4Q9HD90 331 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 TEX10Q9NXF1 929 aaPredicted RBP8.4□□□□□ -1.06
HDDC3-204ENST00000559834 AHSPQ9NZD4 102 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 FETUBQ9UGM5 382 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 CAMK2AQ9UQM7 478 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 CFL2Q9Y281 166 aa8.4□□□□□ -1.06
HDDC3-204ENST00000559834 TNPO3Q9Y5L0 923 aaKnown RBP8.4□□□□□ -1.06
HDDC3-204ENST00000559834 TACC2O95359 2948 aa8.39□□□□□ -1.07
HDDC3-204ENST00000559834 A0A087X1B8 175 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms